RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 GRK5P34947 590 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 RPS27P42677 84 aaKnown RBP10.94□□□□□ -0.66
RTN3-213ENST00000543552 DBPQ10586 325 aaPredicted RBP10.94□□□□□ -0.66
RTN3-213ENST00000543552 CRMP1Q14194 572 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 OR8B8Q15620 311 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 MPPED2Q15777 294 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 SNCBQ16143 134 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 PCK2Q16822 640 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 MICAQ29983 383 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 C11orf91Q3C1V1 193 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 TEX30Q5JUR7 227 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 FAM201AQ5SY85 155 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 GLYATL3Q5SZD4 288 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 LCN8Q6JVE9 175 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 PIGWQ7Z7B1 504 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 DHFR2Q86XF0 187 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 FTMTQ8N4E7 242 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 FITM2Q8N6M3 262 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 PNLDC1Q8NA58 520 aaKnown RBP10.94□□□□□ -0.66
RTN3-213ENST00000543552 OR51L1Q8NGJ5 315 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 OR8D4Q8NGM9 314 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 OR10S1Q8NGN2 331 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 OR9Q1Q8NGQ5 310 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 OR8S1Q8NH09 359 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 OR2AE1Q8NHA4 323 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 ZNF48Q96MX3 618 aaPredicted RBP10.94□□□□□ -0.66
RTN3-213ENST00000543552 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 DDOQ99489 341 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 DGCR6LQ9BY27 220 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 CENPMQ9NSP4 180 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 PCDHGB1Q9Y5G3 927 aa10.94□□□□□ -0.66
RTN3-213ENST00000543552 DOCK11Q5JSL3 2073 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 IGHV3OR16-10A0A075B7F0 116 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 hCG_1807616A0A1W2PRN6 198 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 OOEPA6NGQ2 149 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 ZNF593O00488 134 aaPredicted RBP10.93□□□□□ -0.66
RTN3-213ENST00000543552 SOX14O95416 240 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 SPI1P17947 270 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 EGR1P18146 543 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 PAICSP22234 425 aaKnown RBP10.93□□□□□ -0.66
RTN3-213ENST00000543552 PRKXP51817 358 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 FGF12P61328 243 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 SLC9A3R2Q15599 337 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 TIGD6Q17RP2 521 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 OR2T5Q6IEZ7 315 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 BOLLQ8N9W6 283 aaKnown RBP10.93□□□□□ -0.66
RTN3-213ENST00000543552 OR56B2PQ8NGI1 322 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 OR52H1Q8NGJ2 320 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 OR2T29Q8NH02 315 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 TEX47Q8TBZ9 253 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 NMNAT2Q9BZQ4 307 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 C1orf123Q9NWV4 160 aa10.93□□□□□ -0.66
RTN3-213ENST00000543552 DHRS12A0PJE2 317 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 B2RBV5 119 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 P2RY10O00398 339 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ADAM20O43506 726 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 TIPRLO75663 272 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ECDO95905 644 aaPredicted RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 GYPBP06028 91 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ANXA2P07355 339 aaKnown RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 GRPP07492 148 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 HOXB6P17509 224 aaKnown RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 CX3CR1P49238 355 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 EIF2B1Q14232 305 aaKnown RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 TRIM25Q14258 630 aaKnown RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 PRR31Q5SQ13 230 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ZNF362Q5T0B9 420 aaPredicted RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 METTL11BQ5VVY1 283 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 LYPD4Q6UWN0 246 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 LYPD2Q6UXB3 125 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ZNF841Q6ZN19 808 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 RHOUQ7L0Q8 258 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ZNF511Q8NB15 262 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 SPSB4Q96A44 273 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 C1orf147Q96MC9 270 aaPredicted RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 INTS14Q96SY0 518 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ZNF696Q9H7X3 374 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 UNKLQ9H9P5 680 aaKnown RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 NOX4Q9NPH5 578 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 CMC2Q9NRP2 79 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 ARMC1Q9NVT9 282 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 PRPF19Q9UMS4 504 aaKnown RBP10.92□□□□□ -0.66
RTN3-213ENST00000543552 N6AMT1Q9Y5N5 214 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 U3KQV3 271 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
RTN3-213ENST00000543552 MEGF8Q7Z7M0 2845 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 TCRBV5S2A0A599 114 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 ARRDC5A6NEK1 342 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 ZNF879B4DU55 563 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 C22orf46C9J442 243 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 H3BN98 237 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 TMPRSS2O15393 492 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 TBX1O43435 398 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 TOX4O94842 621 aa10.91□□□□□ -0.66
RTN3-213ENST00000543552 RAP2AP10114 183 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms