RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 OVOL3O00110 214 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 MAGEB4O15481 346 aaPredicted RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 TIMM8AO60220 97 aaPredicted RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 RPP14O95059 124 aaKnown RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 PNPP00491 289 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 CD8AP01732 235 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 UBCP0CG48 685 aaKnown RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 CD53P19397 219 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 EEF1B2P24534 225 aaKnown RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 KRTAP10-9P60411 292 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 ERVS71-1P61550 626 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 ZNF92Q03936 586 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 NKPD1Q17RQ9 610 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 MSMPQ1L6U9 139 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 PCGF3Q3KNV8 242 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 SPATA46Q5T0L3 261 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 ZBTB37Q5TC79 503 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 TMEM244Q5VVB8 128 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 RPL22L1Q6P5R6 122 aaKnown RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 KLBQ86Z14 1044 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 NANOGP1Q8N7R0 232 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 OR2G2Q8NGZ5 317 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 SPRYD4Q8WW59 207 aaPredicted RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 TRMT61AQ96FX7 289 aaKnown RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 SYT3Q9BQG1 590 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 RHNO1Q9BSD3 238 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 TTTY10Q9BZA0 68 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 RAB1BQ9H0U4 201 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 ABCB9Q9NP78 766 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 DYNLRB1Q9NP97 96 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 BRD7Q9NPI1 651 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 TRIM36Q9NQ86 728 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 NKIRAS2Q9NYR9 191 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 TAAR3PQ9P1P4 343 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 ZDHHC8Q9ULC8 765 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 N6AMT1Q9Y5N5 214 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 UTP20O75691 2785 aaKnown RBP10.43□□□□□ -0.74
DDX55-210ENST00000543016 DSCAMO60469 2012 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 NOTCH2Q04721 2471 aa10.43□□□□□ -0.74
DDX55-210ENST00000543016 ASH1LQ9NR48 2969 aaKnown RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 hCG_38984A0A1B0GV85 526 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 TMEM212A6NML5 194 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 CD300LBA8K4G0 201 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 IGLV3-1P01715 115 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 TTRP02766 147 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 ISG15P05161 165 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 ADH4P08319 380 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 CCL1P22362 96 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 MPV17P39210 176 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 MAP2K3P46734 347 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 WNT4P56705 351 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 FAM3AP98173 230 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 BDH1Q02338 343 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 MFGE8Q08431 387 aaPredicted RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 ACSM1Q08AH1 577 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 ALKBH1Q13686 389 aaKnown RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 IRF3Q14653 427 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 OR8B8Q15620 311 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 KCTD21Q4G0X4 260 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 Q6ZSR3 168 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 DOK3Q7L591 496 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 KRT74Q7RTS7 529 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 LRRC75A-AS1Q8N1F1 130 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 SVOPQ8N4V2 548 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 SPERTQ8NA61 448 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 PLPP7Q8NBV4 271 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 ZNF485Q8NCK3 441 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 OR8G5Q8NG78 346 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 OR13G1Q8NGZ3 307 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 NEU4Q8WWR8 484 aaPredicted RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 C10orf35Q96D05 121 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 POFUT1Q9H488 388 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 ISG20L2Q9H9L3 353 aaKnown RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 BARX1Q9HBU1 254 aaPredicted RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 ZNF701Q9NV72 531 aaPredicted RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 MRPL15Q9P015 296 aaKnown RBP10.42□□□□□ -0.74
DDX55-210ENST00000543016 ZNF319Q9P2F9 582 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 CLEC2DQ9UHP7 191 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 GTF2A1LQ9UNN4 478 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 SLC22A13Q9Y226 551 aa10.42□□□□□ -0.74
DDX55-210ENST00000543016 A0A1B0GVI7 797 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 A0A1B0GWJ7 208 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 C17orf100A8MU93 164 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 DHRS3O75911 302 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 CLPTM1O96005 669 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 CD1AP06126 327 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 TNFSF4P23510 183 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 GSK3AP49840 483 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 MMP15P51511 669 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 MVKQ03426 396 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 MZT1Q08AG7 82 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 HLXQ14774 488 aaPredicted RBP10.41□□□□□ -0.74
DDX55-210ENST00000543016 SPHARQ15513 63 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 WDR38Q5JTN6 314 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 OR2T2Q6IF00 324 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 CDH24Q86UP0 819 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 LRP11Q86VZ4 500 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 OR2AE1Q8NHA4 323 aa10.41□□□□□ -0.74
DDX55-210ENST00000543016 CACNG6Q9BXT2 260 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms