RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ITGA2P17301 1181 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 EDNRAP25101 427 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 ARR3P36575 388 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 OR1E2P47887 323 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 CSNK1A1P48729 337 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 GSK3BP49841 420 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 FABP6P51161 128 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 SMIM11AP58511 58 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 TUBA1BP68363 451 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 POU3F1Q03052 451 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 CHRNB3Q05901 458 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 KRR1Q13601 381 aaKnown RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 APOFQ13790 326 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 TRAM2Q15035 370 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 ANKDD1AQ495B1 522 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 KCTD21Q4G0X4 260 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 C9orf152Q5JTZ5 239 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 SAMD4BQ5PRF9 694 aaKnown RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 OGFRL1Q5TC84 451 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 CARD17Q5XLA6 110 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 DHRS7BQ6IAN0 325 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 UGT2A3Q6UWM9 527 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 TUBA1AQ71U36 451 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 SLC35D2Q76EJ3 337 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 NANOGNBQ7Z5D8 188 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 IQCF2Q8IXL9 164 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 C20orf196Q8IYI0 205 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 PACRGLQ8N7B6 248 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 WDR31Q8NA23 367 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 TSPAN14Q8NG11 270 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 OR4D11Q8NGI4 311 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 OR6X1Q8NH79 312 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 CHPT1Q8WUD6 406 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 BCL2L2Q92843 193 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 NRBF2Q96F24 287 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 PRRC1Q96M27 445 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 OR2M2Q96R28 347 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 DDOQ99489 341 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 DHRS9Q9BPW9 319 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 BCL7BQ9BQE9 202 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 WFDC6Q9BQY6 131 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 C1QTNF6Q9BXI9 259 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 RSPO3Q9BXY4 272 aaPredicted RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 MMP27Q9H306 513 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 CRLF2Q9HC73 371 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 B3GAT1Q9P2W7 334 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 ABCD2Q9UBJ2 740 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 FBXL3Q9UKT7 428 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 SAMD4AQ9UPU9 718 aaKnown RBP4.63□□□□□ -1.67
CPSF7-220ENST00000541963 FREM1Q5H8C1 2179 aa4.63□□□□□ -1.67
CPSF7-220ENST00000541963 A0A087WXM4 84 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 A0A1B0GVG6 124 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 A0A1W2PR80 420 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 LRRN3E7EW58 273 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 NME4O00746 187 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 TRAF3IP2O43734 574 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 LYPD3O95274 346 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 STAMBPO95630 424 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 IGHG1P01857 330 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 THY1P04216 161 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 IGKV2-30P06310 120 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 ASAH2BP0C7U1 165 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 OCM2P0CE71 109 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 OCMP0CE72 109 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 IGHV4-30-4P0DP06 118 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 SAGP10523 405 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 IFI30P13284 250 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 HLA-DOBP13765 273 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 CBR1P16152 277 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 GUCA1AP43080 201 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 SLC9A3P48764 834 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 DAP3P51398 398 aaKnown RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 BCAP31P51572 246 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 CRYBA2P53672 197 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 CDH11P55287 796 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 FOXG1P55316 489 aaPredicted RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 BIDP55957 195 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 ATP5J2P56134 94 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 PPP2R2BQ00005 443 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 CAMK2DQ13557 499 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 RGS21Q2M5E4 152 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 CEACAM16Q2WEN9 425 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 HIKESHIQ53FT3 197 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 SLX4IPQ5VYV7 408 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 KRT80Q6KB66 452 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 ZNF544Q6NX49 715 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 ZNF730Q6ZMV8 503 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 WDR88Q6ZMY6 472 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 PIWIL3Q7Z3Z3 882 aaKnown RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 C1QL2Q7Z5L3 287 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 DPPA2Q7Z7J5 298 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 NKAIN4Q8IVV8 208 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 PGAM4Q8N0Y7 254 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 KBTBD8Q8NFY9 601 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 OR4F15Q8NGB8 312 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 THAP6Q8TBB0 222 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 TMEM255BQ8WV15 326 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 TRUB1Q8WWH5 349 aaKnown RBP4.62□□□□□ -1.67
CPSF7-220ENST00000541963 LIPHQ8WWY8 451 aa4.62□□□□□ -1.67
CPSF7-220ENST00000541963 S100ZQ8WXG8 99 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms