RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 CNIH2Q6PI25 160 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 TFAP2EQ6VUC0 442 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 PRSS41Q7RTY9 318 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 CYP4Z1Q86W10 505 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 NAXDQ8IW45 347 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 C10orf82Q8WW14 230 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 RPEQ96AT9 228 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 LINC00479Q96M42 142 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 FOXN4Q96NZ1 517 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 SERPINI1Q99574 410 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 KCTD14Q9BQ13 255 aaPredicted RBP3.97□□□□□ -1.77
CIT-211ENST00000541841 UTP23Q9BRU9 249 aaKnown RBP3.97□□□□□ -1.77
CIT-211ENST00000541841 MRPS26Q9BYN8 205 aaKnown RBP3.97□□□□□ -1.77
CIT-211ENST00000541841 CD209Q9NNX6 404 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 MRPL40Q9NQ50 206 aaKnown RBP3.97□□□□□ -1.77
CIT-211ENST00000541841 CTPS2Q9NRF8 586 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 CLN6Q9NWW5 311 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 MUTYHQ9UIF7 546 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 SCML1Q9UN30 329 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 STYXL1Q9Y6J8 313 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 V9GYY9 64 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 LY75O60449 1722 aa3.97□□□□□ -1.77
CIT-211ENST00000541841 BAZ2BQ9UIF8 2168 aaKnown RBP3.97□□□□□ -1.77
CIT-211ENST00000541841 TDRD15B5MCY1 1934 aaKnown RBP3.97□□□□□ -1.77
CIT-211ENST00000541841 CLUHO75153 1309 aa3.96□□□□□ -1.77
CIT-211ENST00000541841 FOCADQ5VW36 1801 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 A0A0J9YWU9 116 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 MGAT4DA6NG13 374 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 CCDC160A6NGH7 325 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 SHISA9B4DS77 424 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 K7EMT4 169 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 KLHL2O95198 593 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 CST4P01036 141 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 RPN2P04844 631 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 IDO1P14902 403 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 CSNK2A2P19784 350 aaPredicted RBP3.96□□□□□ -1.78
CIT-211ENST00000541841 RPL5P46777 297 aaKnown RBP3.96□□□□□ -1.78
CIT-211ENST00000541841 OR2B6P58173 313 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 FCHO2Q0JRZ9 810 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 C1orf146Q5VVC0 180 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 OLFML2AQ68BL7 652 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 ZFP1Q6P2D0 407 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 IZUMO2Q6UXV1 221 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 C12orf54Q6X4T0 127 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 TMPRSS11AQ6ZMR5 421 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 TMUB2Q71RG4 321 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 PPP1R27Q86WC6 154 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 MDS2Q8NDY4 140 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 ACER1Q8TDN7 264 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 NAT14Q8WUY8 206 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 ACOT11Q8WXI4 607 aaPredicted RBP3.96□□□□□ -1.78
CIT-211ENST00000541841 RASL10AQ92737 203 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 FGF14Q92915 247 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 TMEM54Q969K7 222 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 DGCR14Q96DF8 476 aaKnown RBP3.96□□□□□ -1.78
CIT-211ENST00000541841 RANBP9Q96S59 729 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 FOXC2Q99958 501 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 TRIM15Q9C019 465 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 C20orf85Q9H1P6 137 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 C1orf198Q9H425 327 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 UBE2ZQ9H832 354 aaPredicted RBP3.96□□□□□ -1.78
CIT-211ENST00000541841 PSTPIP2Q9H939 334 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 OR2S2Q9NQN1 319 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 MCUBQ9NWR8 336 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 CALYQ9NYX4 217 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 SLC17A7Q9P2U7 560 aa3.96□□□□□ -1.78
CIT-211ENST00000541841 NXT1Q9UKK6 140 aaKnown RBP3.96□□□□□ -1.78
CIT-211ENST00000541841 ASTN1O14525 1302 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 NFASCO94856 1347 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 DDX60LQ5H9U9 1706 aaKnown RBP3.95□□□□□ -1.78
CIT-211ENST00000541841 CDK5RAP2Q96SN8 1893 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 ZNF831Q5JPB2 1677 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 IGHV1OR15-1A0A075B7D0 117 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 A0A0G2JND7 137 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 EPM2AB3EWF7 344 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 SMKR1H3BMG3 65 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 H3BN98 237 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 K7EN84 100 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 CYTH3O43739 400 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 SLC37A4O43826 429 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 ZNF189O75820 626 aaPredicted RBP3.95□□□□□ -1.78
CIT-211ENST00000541841 CATP04040 527 aaKnown RBP3.95□□□□□ -1.78
CIT-211ENST00000541841 BGNP21810 368 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 GTF2H1P32780 548 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 BTCP35070 178 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 CRATP43155 626 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 GPR6P46095 362 aaPredicted RBP3.95□□□□□ -1.78
CIT-211ENST00000541841 SUB1P53999 127 aaKnown RBP eCLIP3.95□□□□□ -1.78
CIT-211ENST00000541841 NUP107P57740 925 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 ESRRGP62508 458 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 TGFBR3Q03167 851 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 ZNF92Q03936 586 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 RUNX3Q13761 415 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 TGIF1Q15583 401 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 QRICH1Q2TAL8 776 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 APOBEC3HQ6NTF7 200 aaKnown RBP3.95□□□□□ -1.78
CIT-211ENST00000541841 C4orf22Q6V702 233 aa3.95□□□□□ -1.78
CIT-211ENST00000541841 ABHD12BQ7Z5M8 362 aaPredicted RBP3.95□□□□□ -1.78
CIT-211ENST00000541841 SETD3Q86TU7 594 aaPredicted RBP3.95□□□□□ -1.78
CIT-211ENST00000541841 LRRC6Q86X45 466 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms