RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 UNC119BA6NIH7 251 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 ZNF670-ZNF695F2Z2N8 137 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 NPIPB9F8W1W9 429 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 CSTAP01040 98 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 FAM157BP0CG42 384 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 CPEP16870 476 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 ETV6P41212 452 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 APOBEC1P41238 236 aaKnown RBP8.17□□□□□ -1.1
CHFR-220ENST00000541817 OMPP47874 163 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 EFNB1P98172 346 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 IFITM3Q01628 133 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 DCST2Q5T1A1 773 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 TYW3Q6IPR3 259 aaKnown RBP8.17□□□□□ -1.1
CHFR-220ENST00000541817 ZNF836Q6ZNA1 936 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 BCDIN3DQ7Z5W3 292 aaKnown RBP8.17□□□□□ -1.1
CHFR-220ENST00000541817 C1orf174Q8IYL3 243 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 RNF113BQ8IZP6 322 aaKnown RBP8.17□□□□□ -1.1
CHFR-220ENST00000541817 IL17RDQ8NFM7 739 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 OR52L1Q8NGH7 329 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 TMEM234Q8WY98 164 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 UFD1Q92890 307 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 STACQ99469 402 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 SDF2Q99470 211 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 CCDC32Q9BV29 185 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 HOXD1Q9GZZ0 328 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 TMEM5Q9Y2B1 443 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 SPIN1Q9Y657 262 aaPredicted RBP8.17□□□□□ -1.1
CHFR-220ENST00000541817 CDH10Q9Y6N8 788 aa8.17□□□□□ -1.1
CHFR-220ENST00000541817 TMED7-TICAM2A0A0A6YYA0 188 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 ZNF816-ZNF321PA0A0X1KG74 233 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 BOLA2-SMG1P6H3BVE0 249 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 RGS5O15539 181 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 DNPH1O43598 174 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 FCMRO60667 390 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 EIF1BO60739 113 aaKnown RBP8.16□□□□□ -1.1
CHFR-220ENST00000541817 ZNF432O94892 652 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 PTTG1O95997 202 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 IL1AP01583 271 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 IGHV4-59P01825 116 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 ZNF14P17017 642 aaPredicted RBP8.16□□□□□ -1.1
CHFR-220ENST00000541817 ATP6V1E1P36543 226 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 SLC6A9P48067 706 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 ETV1P50549 477 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 GALK2Q01415 458 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 TPBGQ13641 420 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 OR7A5Q15622 319 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 CEACAM16Q2WEN9 425 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 NRN1LQ496H8 165 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 DMRTC1Q5HYR2 192 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 EXOSC6Q5RKV6 272 aaKnown RBP8.16□□□□□ -1.1
CHFR-220ENST00000541817 LIPKQ5VXJ0 399 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 RPL13AP3Q6NVV1 102 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 CREB3L2Q70SY1 520 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 CCDC190Q86UF4 302 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 SNX29P2Q8IUI4 249 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 GID4Q8IVV7 300 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 NKAIN4Q8IVV8 208 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 NRMQ8IXM6 262 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 KDM8Q8N371 416 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 ZBTB8BQ8NAP8 495 aaPredicted RBP8.16□□□□□ -1.1
CHFR-220ENST00000541817 AP3S1Q92572 193 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 UPRTQ96BW1 309 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 ZG16BQ96DA0 208 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 ZNF75AQ96N20 296 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 NEURL2Q9BR09 285 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 PRDM13Q9H4Q3 707 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 SAP30LQ9HAJ7 183 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 TMEM27Q9HBJ8 222 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 DUSP22Q9NRW4 184 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 SNTG1Q9NSN8 517 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 B3GNT2Q9NY97 397 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 IL20Q9NYY1 176 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 SLC7A7Q9UM01 511 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 FOXJ3Q9UPW0 622 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 TRAPPC4Q9Y296 219 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 TMED7Q9Y3B3 224 aa8.16□□□□□ -1.1
CHFR-220ENST00000541817 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 SURF4O15260 269 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 GPR37O15354 613 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 SPRY3O43610 288 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 FMO6PO60774 539 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 CDRT1O95170 752 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 PATE4P0C8F1 98 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 OR8G3PP0DMU2 310 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 HOXB1P14653 301 aaPredicted RBP8.15□□□□□ -1.1
CHFR-220ENST00000541817 IGLL1P15814 213 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 GTF2E2P29084 291 aaKnown RBP8.15□□□□□ -1.1
CHFR-220ENST00000541817 TNFSF8P32971 234 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 RPS19P39019 145 aaKnown RBP8.15□□□□□ -1.1
CHFR-220ENST00000541817 GPR4P46093 362 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 SLC9A3P48764 834 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 NSUN5P1Q3KNT7 163 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 CLEC12AQ5QGZ9 265 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 ARMC4Q5T2S8 1044 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 STEAP3Q658P3 488 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 TMEM225Q6GV28 225 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 RGS7BPQ6MZT1 257 aaPredicted RBP8.15□□□□□ -1.1
CHFR-220ENST00000541817 TMPRSS11AQ6ZMR5 421 aa8.15□□□□□ -1.1
CHFR-220ENST00000541817 OR8H2Q8N162 312 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms