RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 STRADBQ9C0K7 418 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 ZFP57Q9NU63 452 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 COMMD9Q9P000 198 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DHDHQ9UQ10 334 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 NPIPB9F8W1W9 429 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 ALOX5APP20292 161 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 LY6G6FQ5SQ64 297 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 CORO6Q6QEF8 472 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 FAM122BQ7Z309 247 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 FOXRED2Q8IWF2 684 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 ZNF595Q8IYB9 648 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 OR51A2Q8NGJ7 313 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 PFDN5Q99471 154 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 TAS2R4Q9NYW5 299 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 HIF3AQ9Y2N7 669 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 A0A1B0GV50 99 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 A0A1B0GW55 424 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 RFPL4AA6NLU0 287 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 SNRPGP15A8MWD9 76 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 RFPL4AL1F8VTS6 287 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 XRCC3O43542 346 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 EIF4E2O60573 245 aaKnown RBP12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 WNT11O96014 354 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 KLK3P07288 261 aaPredicted RBP12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 HEXBP07686 556 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DUX4L2P0CJ85 424 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DUX4L3P0CJ86 424 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DUX4L4P0CJ87 422 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DUX4L5P0CJ88 424 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DUX4L6P0CJ89 424 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DUX4L7P0CJ90 424 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 HOXB1P14653 301 aaPredicted RBP12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 KIR3DL2P43630 455 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 SKP1P63208 163 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 IL10RAQ13651 578 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 ACKR1Q16570 336 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 KLHL26Q53HC5 615 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 STEAP1BQ6NZ63 245 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 ASH2LQ9UBL3 628 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 DUX4Q9UBX2 424 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 PRODH2Q9UF12 536 aa12.75□□□□□ -0.37
SFSWAP-210ENST00000541286 H7C417 338 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 RAB3DO95716 219 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 OR4E1P0C645 316 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 VAMP1P23763 118 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 GNALP38405 381 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 DNASE1L1P49184 302 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 EIF2B1Q14232 305 aaKnown RBP12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 TMPPEQ6ZT21 453 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 CDC20BQ86Y33 519 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 PHYHIPQ92561 330 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 SLC25A44Q96H78 314 aaPredicted RBP12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 SCNM1Q9BWG6 230 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 FAM117AQ9C073 453 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 LAT2Q9GZY6 243 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 MTFP1Q9UDX5 166 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 PQLC2LA1A4F0 135 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 H0YIG0 161 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 SULT1B1O43704 296 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 AKAIN1P0CW23 69 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 RPS4XP62701 263 aaKnown RBP12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 ZNF117Q03924 483 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 SKP2Q13309 424 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 ELFN2Q5R3F8 820 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 PMM1Q92871 262 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 PLEKHA1Q9HB21 404 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 EMC9Q9Y3B6 208 aa12.74□□□□□ -0.37
SFSWAP-210ENST00000541286 TMEM235A6NFC5 223 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 TMEM212A6NML5 194 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 AQP8O94778 261 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 UBBP0CG47 229 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 UBCP0CG48 685 aaKnown RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 PGAM2P15259 253 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 RPS27AP62979 156 aaKnown RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 UBA52P62987 128 aaKnown RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 MFGE8Q08431 387 aaPredicted RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 IL11RAQ14626 422 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 SGCAQ16586 387 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 GFOD2Q3B7J2 385 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 ADAM5Q6NVV9 412 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 BIVMQ86UB2 503 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 IL22RA1Q8N6P7 574 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 C4orf45Q96LM5 186 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 DCBLD2Q96PD2 775 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 NUDT9Q9BW91 350 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 PAPOLGQ9BWT3 736 aaKnown RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 PIGMQ9H3S5 423 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CKLFQ9UBR5 152 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 KCNK7Q9Y2U2 307 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 PKD1L2Q7Z442 2459 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 hCG_1809904A0A1W2PP81 198 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 A0A1W2PR64 198 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 A0A1W2PRV1 198 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 MED19A0JLT2 244 aaPredicted RBP12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 CEACAM1P13688 526 aa12.73□□□□□ -0.37
SFSWAP-210ENST00000541286 RPA2P15927 270 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms