RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 STEAP2Q8NFT2 490 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 S100ZQ8WXG8 99 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 ADAT3Q96EY9 351 aaPredicted RBP15.37■□□□□ 0.05
CLIP1-215ENST00000541108 MS4A3Q96HJ5 214 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 CNTNAP3BQ96NU0 1288 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 SLC30A2Q9BRI3 323 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 SOX7Q9BT81 388 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 MRI1Q9BV20 369 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 CNTNAP3Q9BZ76 1288 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 PLEKHA1Q9HB21 404 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 OSGIN2Q9Y236 505 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 SLC25A15Q9Y619 301 aa15.37■□□□□ 0.05
CLIP1-215ENST00000541108 A0A1W2PR80 420 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 ANXA2P2A6NMY6 339 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 IFITM5A6NNB3 132 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 MAS1P04201 325 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 CD37P11049 281 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 CCL2P13500 99 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 ZNF20P17024 532 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 ADRA2CP18825 462 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 CFPP27918 469 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 PPP3R1P63098 170 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 GLYATL3Q5SZD4 288 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 IDNKQ5T6J7 187 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 ZNF529Q6P280 563 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 LIX1LQ8IVB5 337 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 RELL2Q8NC24 303 aaPredicted RBP15.36■□□□□ 0.05
CLIP1-215ENST00000541108 OR10A4Q9H209 315 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 SMURF1Q9HCE7 757 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 TAS2R4Q9NYW5 299 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 NBEAQ8NFP9 2946 aa15.36■□□□□ 0.05
CLIP1-215ENST00000541108 AIPO00170 330 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 CCL21O00585 134 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 CTDSP2O14595 271 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 LMX1BO60663 402 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 ALX3O95076 343 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 IGLV1-44P01699 117 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 INHBBP09529 407 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 MAP2K3P46734 347 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 IDH3GP51553 393 aaPredicted RBP15.35■□□□□ 0.05
CLIP1-215ENST00000541108 MALLQ13021 153 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 ST3GAL2Q16842 350 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 C3orf36Q3SXR2 165 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 DDI2Q5TDH0 399 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 NCCRP1Q6ZVX7 275 aaPredicted RBP15.35■□□□□ 0.05
CLIP1-215ENST00000541108 SSX8Q7RTT4 187 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 NKAIN3Q8N8D7 197 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 OR5L1Q8NGL2 311 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 PP6455Q8WZ26 134 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 S100PBPQ96BU1 408 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 MUCL1Q96DR8 90 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 GFI1Q99684 422 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 OPA3Q9H6K4 179 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 ABRACLQ9P1F3 81 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 DAPK2Q9UIK4 370 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 ATXN7O15265 892 aaPredicted RBP15.35■□□□□ 0.05
CLIP1-215ENST00000541108 THBS2P35442 1172 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 THBS4P35443 961 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 GNALP38405 381 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 FAM3AP98173 230 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 FAM27E3Q08E93 113 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 OR8B8Q15620 311 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 SLC25A35Q3KQZ1 300 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 SEMA6DQ8NFY4 1073 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 OR2AE1Q8NHA4 323 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 FOXRED1Q96CU9 486 aaPredicted RBP15.35■□□□□ 0.05
CLIP1-215ENST00000541108 REPIN1Q9BWE0 567 aaKnown RBP15.35■□□□□ 0.05
CLIP1-215ENST00000541108 TMEM138Q9NPI0 162 aa15.35■□□□□ 0.05
CLIP1-215ENST00000541108 EIF3KQ9UBQ5 218 aaKnown RBP15.35■□□□□ 0.05
CLIP1-215ENST00000541108 RGS5O15539 181 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 ERCC1P07992 297 aaPredicted RBP15.34■□□□□ 0.05
CLIP1-215ENST00000541108 ATF1P18846 271 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 RAB3AP20336 220 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 ZNF92Q03936 586 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 RIPPLY1Q0D2K3 151 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 ZBTB37Q5TC79 503 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 GLT8D1Q68CQ7 371 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 UNQ6126/PRO20091Q6UXV3 157 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 UTS2BQ765I0 119 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 OR1M1Q8NGA1 313 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 WDFY2Q96P53 400 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 CDH20Q9HBT6 801 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 HMG20AQ9NP66 347 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 CMAHPQ9Y471 501 aa15.34■□□□□ 0.05
CLIP1-215ENST00000541108 hCG_38984A0A1B0GV85 526 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 CLDN25C9JDP6 229 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 C16orf97H3BN30 126 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 NGFP01138 241 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 CELA3BP08861 270 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 BDKRB2P30411 391 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 ETV6P41212 452 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 WNT5AP41221 380 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 SCAND1P57086 179 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 CDH26Q8IXH8 852 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 C1orf174Q8IYL3 243 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 ZNF101Q8IZC7 436 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 PAQR4Q8N4S7 273 aaPredicted RBP15.33■□□□□ 0.04
CLIP1-215ENST00000541108 ACTR6Q9GZN1 396 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 CHST5Q9GZS9 411 aa15.33■□□□□ 0.04
CLIP1-215ENST00000541108 AKIP1Q9NQ31 210 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms