RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ECDO95905 644 aaPredicted RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 ANXA2P07355 339 aaKnown RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 WNT2P09544 360 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 PYCR1P32322 319 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 NAA10P41227 235 aaPredicted RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 PITPNBP48739 271 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 CX3CR1P49238 355 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 IL5RAQ01344 420 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 EIF2B1Q14232 305 aaKnown RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 ZNF404Q494X3 552 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 LCN1P1Q5VSP4 162 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 KCTD18Q6PI47 426 aaPredicted RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 PNLDC1Q8NA58 520 aaKnown RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 PAPD5Q8NDF8 572 aaKnown RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 OR9Q1Q8NGQ5 310 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 RAB40AQ8WXH6 277 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 SPSB4Q96A44 273 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 MAP6Q96JE9 813 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 SIGLEC11Q96RL6 698 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 DDOQ99489 341 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 NMNAT2Q9BZQ4 307 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 MS4A7Q9GZW8 240 aaPredicted RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 MMADHCQ9H3L0 296 aaPredicted RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 FN3KQ9H479 309 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 POFUT1Q9H488 388 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 TMEM165Q9HC07 324 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 PNRC2Q9NPJ4 139 aaKnown RBP8.73□□□□□ -1.01
CDCA3-208ENST00000540683 TMEM14AQ9Y6G1 99 aa8.73□□□□□ -1.01
CDCA3-208ENST00000540683 DNHD1Q96M86 4753 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 ANK3Q12955 4377 aaKnown RBP8.72□□□□□ -1.01
CDCA3-208ENST00000540683 TVP23AA6NH52 213 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 ACOD1A6NK06 481 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 F5H5P2 479 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 ACOT8O14734 319 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 MLNRO43193 412 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 TBX1O43435 398 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 DNAJC8O75937 253 aaPredicted RBP8.72□□□□□ -1.01
CDCA3-208ENST00000540683 SOX14O95416 240 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 PTBP3O95758 552 aaKnown RBP8.72□□□□□ -1.01
CDCA3-208ENST00000540683 GPANK1O95872 356 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 H2BFMP0C1H6 154 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 OSMP13725 252 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 MUC1P15941 1255 aaPredicted RBP8.72□□□□□ -1.01
CDCA3-208ENST00000540683 CA6P23280 308 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 POU1F1P28069 291 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 MS4A2Q01362 244 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 RSPO1Q2MKA7 263 aaPredicted RBP8.72□□□□□ -1.01
CDCA3-208ENST00000540683 TMEM255AQ5JRV8 349 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 SPATA24Q86W54 205 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 ERI1Q8IV48 349 aaKnown RBP8.72□□□□□ -1.01
CDCA3-208ENST00000540683 SEMA6DQ8NFY4 1073 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 OR6N2Q8NGY6 317 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 RNF133Q8WVZ7 376 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 SLC25A28Q96A46 364 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 PLA2G12AQ9BZM1 189 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 WDR76Q9H967 626 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 MARCH7Q9H992 704 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 RNPEPL1Q9HAU8 725 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 ARMC1Q9NVT9 282 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 PDP1Q9P0J1 537 aaPredicted RBP8.72□□□□□ -1.01
CDCA3-208ENST00000540683 MPC1Q9Y5U8 109 aa8.72□□□□□ -1.01
CDCA3-208ENST00000540683 A6NJY4 79 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 A6NLC8 198 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 TMEM210A6NLX4 147 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 LGALS8O00214 317 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 CYB5R3P00387 301 aaPredicted RBP8.71□□□□□ -1.02
CDCA3-208ENST00000540683 LYNP07948 512 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 FCGR1AP12314 374 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 ATP6V1B1P15313 513 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 COMPP49747 757 aaPredicted RBP8.71□□□□□ -1.02
CDCA3-208ENST00000540683 PRKXP51817 358 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 RPS7P62081 194 aaKnown RBP8.71□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF92Q03936 586 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 FOXL1Q12952 345 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 OR8B8Q15620 311 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 MICBQ29980 383 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF362Q5T0B9 420 aaPredicted RBP8.71□□□□□ -1.02
CDCA3-208ENST00000540683 GPR157Q5UAW9 335 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 DEGS2Q6QHC5 323 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 DPY19L4Q7Z388 723 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 ADGRG5Q8IZF4 528 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 C3orf56Q8N813 242 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 OR51L1Q8NGJ5 315 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 OR8D4Q8NGM9 314 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 CANT1Q8WVQ1 401 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 ASB17Q8WXJ9 295 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 C12orf43Q96C57 262 aaKnown RBP8.71□□□□□ -1.02
CDCA3-208ENST00000540683 REEP6Q96HR9 211 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 PGAM5Q96HS1 289 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 HIST1H2AAQ96QV6 131 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 MNTQ99583 582 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 MICU1Q9BPX6 476 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 TMEM246Q9BRR3 403 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 RTL8AQ9BWD3 113 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 OSBPL10Q9BXB5 764 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 H2AFY2Q9P0M6 372 aaPredicted RBP8.71□□□□□ -1.02
CDCA3-208ENST00000540683 DOCK11Q5JSL3 2073 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 SVEP1Q4LDE5 3571 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 CUBNO60494 3623 aa8.71□□□□□ -1.02
CDCA3-208ENST00000540683 IGHV2-70DA0A0C4DH43 119 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms