RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 ZNF787Q6DD87 383 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF529Q6P280 563 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 UNQ9370/PRO34162Q6UXP9 181 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF704Q6ZNC4 412 aaPredicted RBP9.06□□□□□ -0.96
VPS33A-204ENST00000540669 SLC16A12Q6ZSM3 486 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 FAM57BQ71RH2 274 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 TMEM200AQ86VY9 491 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.06□□□□□ -0.96
VPS33A-204ENST00000540669 CCDC54Q8NEL0 328 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 KBTBD8Q8NFY9 601 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 SGK3Q96BR1 496 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 PLPPR2Q96GM1 343 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 RADILQ96JH8 1075 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 PDCD1LG2Q9BQ51 273 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 SOX7Q9BT81 388 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 BCL2L14Q9BZR8 327 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 ESRP2Q9H6T0 727 aaKnown RBP9.06□□□□□ -0.96
VPS33A-204ENST00000540669 SP140LQ9H930 580 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 CDH20Q9HBT6 801 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 STARD10Q9Y365 291 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 RNF115Q9Y4L5 304 aa9.06□□□□□ -0.96
VPS33A-204ENST00000540669 A6NNC1 897 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 CCRL2O00421 344 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 RPP14O95059 124 aaKnown RBP9.05□□□□□ -0.96
VPS33A-204ENST00000540669 RAC2P15153 192 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 CELP19835 753 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 KITLGP21583 273 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ACKR3P25106 362 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 PSMA1P25786 263 aaKnown RBP9.05□□□□□ -0.96
VPS33A-204ENST00000540669 RPL5P46777 297 aaKnown RBP9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ERVS71-1P61550 626 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 PPP1CBP62140 327 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 FAM3AP98173 230 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF92Q03936 586 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 SNTB2Q13425 540 aaKnown RBP9.05□□□□□ -0.96
VPS33A-204ENST00000540669 TAF13Q15543 124 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 TSTQ16762 297 aaKnown RBP9.05□□□□□ -0.96
VPS33A-204ENST00000540669 YIF1BQ5BJH7 314 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ARMCX4Q5H9R4 360 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ZBTB37Q5TC79 503 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 TMEM244Q5VVB8 128 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 LIPKQ5VXJ0 399 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 TMEM91Q6ZNR0 172 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ZFP41Q8N8Y5 198 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 OR51A4Q8NGJ6 313 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 OR14K1Q8NGZ2 314 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 OR2AE1Q8NHA4 323 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 UBASH3BQ8TF42 649 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 GHSRQ92847 366 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 UFD1Q92890 307 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 TRMT61AQ96FX7 289 aaKnown RBP9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ZC3HAV1LQ96H79 300 aaKnown RBP9.05□□□□□ -0.96
VPS33A-204ENST00000540669 KCNS3Q9BQ31 491 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 OR10A2Q9H208 303 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 VCX3AQ9NNX9 186 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 GPR84Q9NQS5 396 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 ZNF281Q9Y2X9 895 aa9.05□□□□□ -0.96
VPS33A-204ENST00000540669 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 TRBV2A0A0J9YWF9 115 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 TRIM64BA6NI03 449 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 IQCF6A8MYZ5 107 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 E7EQL1 145 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 PIN1P1O15428 100 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 GPX5O75715 221 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 DHRS3O75911 302 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 GABARAPO95166 117 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 IGHV3-13P01766 116 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 LCATP04180 440 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 ANXA2P07355 339 aaKnown RBP9.04□□□□□ -0.96
VPS33A-204ENST00000540669 CD37P11049 281 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 FSTP19883 344 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 CFL1P23528 166 aaKnown RBP9.04□□□□□ -0.96
VPS33A-204ENST00000540669 PSMB9P28065 219 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 FGF9P31371 208 aaPredicted RBP9.04□□□□□ -0.96
VPS33A-204ENST00000540669 CRYBB2P43320 205 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 SLC6A9P48067 706 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 RPS23P62266 143 aaKnown RBP9.04□□□□□ -0.96
VPS33A-204ENST00000540669 RPS25P62851 125 aaKnown RBP9.04□□□□□ -0.96
VPS33A-204ENST00000540669 EFNB3Q15768 340 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 ADIPOQQ15848 244 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 ARL9Q6T311 187 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 LYPD6Q86Y78 171 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 PARP16Q8N5Y8 322 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 OR13C5Q8NGS8 318 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 ABHD4Q8TB40 342 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 SLC25A40Q8TBP6 338 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 OR51E1Q8TCB6 317 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 KLF14Q8TD94 323 aaPredicted RBP9.04□□□□□ -0.96
VPS33A-204ENST00000540669 TMIGD2Q96BF3 282 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 C14orf79Q96F83 325 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 REEP6Q96HR9 211 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 PGAM5Q96HS1 289 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 OR2J1Q9GZK6 312 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 CA10Q9NS85 328 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 SCOCQ9UIL1 159 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 HHLA2Q9UM44 414 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 POLQO75417 2590 aa9.04□□□□□ -0.96
VPS33A-204ENST00000540669 CHD3Q12873 2000 aaKnown RBP9.04□□□□□ -0.96
VPS33A-204ENST00000540669 CACNA1DQ01668 2161 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms