RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 TMEM71Q6P5X7 295 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 TDHQ8IZJ6 230 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 DDIT4LQ96D03 193 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 SAV1Q9H4B6 383 aaPredicted RBP10.9□□□□□ -0.66
NPC1-202ENST00000540608 RAB18Q9NP72 206 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 FANCFQ9NPI8 374 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 SUSD2Q9UGT4 822 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 A0A0B4J2A0 478 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 SFT2D2O95562 160 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 LYL1P12980 280 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 BIDP55957 195 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 RNF4P78317 190 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 PLAC9Q5JTB6 97 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 GLIPR1L1Q6UWM5 242 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 NAA40Q86UY6 237 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 ARRDC1Q8N5I2 433 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 ZSCAN4Q8NAM6 433 aaPredicted RBP10.9□□□□□ -0.66
NPC1-202ENST00000540608 OR51E1Q8TCB6 317 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 ZC3H10Q96K80 434 aaKnown RBP10.9□□□□□ -0.66
NPC1-202ENST00000540608 C5orf34Q96MH7 638 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 EMC6Q9BV81 110 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 C5orf66Q9H5L9 145 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 SLC2A4RGQ9NR83 387 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 PISDQ9UG56 409 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 SHPKQ9UHJ6 478 aa10.9□□□□□ -0.66
NPC1-202ENST00000540608 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.66
NPC1-202ENST00000540608 RHPN2P1A8MT19 583 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 FAM157CP0CG43 387 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 ZNF20P17024 532 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 CD27P26842 260 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 LAP3P28838 519 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 HFEQ30201 348 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 C1orf189Q5VU69 101 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 HAGHLQ6PII5 290 aaPredicted RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 OGFOD3Q6PK18 319 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 LANCL3Q6ZV70 420 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 RNF144BQ7Z419 303 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 KCNG3Q8TAE7 436 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 TMEM230Q96A57 120 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 RAB3CQ96E17 227 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 CNTNAP3BQ96NU0 1288 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 MRPL13Q9BYD1 178 aaKnown RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 MMP26Q9NRE1 261 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 SRPK3Q9UPE1 567 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 B3GALT5Q9Y2C3 310 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 MRPS28Q9Y2Q9 187 aaKnown RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 RP1P56715 2156 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 LIPT2A6NK58 231 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 F8W036 122 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 SOCS1O15524 211 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 HIST1H1DP16402 221 aaKnown RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 BCKDHBP21953 392 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 SUMO3P55854 103 aaPredicted RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 OR1D5P58170 312 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 BLOC1S1P78537 153 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 DCDP81605 110 aaKnown RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 SRSF3P84103 164 aaKnown RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 C14orf28Q4W4Y0 310 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 THEM4Q5T1C6 240 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 DHRS7BQ6IAN0 325 aaPredicted RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 TMEM88Q6PEY1 159 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 C16orf47Q6ZP98 133 aaPredicted RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 TMPPEQ6ZT21 453 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 TMEM104Q8NE00 496 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 PLPP5Q8NEB5 264 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 C1orf147Q96MC9 270 aaPredicted RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 SCGB3A2Q96PL1 93 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 OCSTAMPQ9BR26 566 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 MOB1AQ9H8S9 216 aa10.89□□□□□ -0.67
NPC1-202ENST00000540608 ARID1BQ8NFD5 2236 aaPredicted RBP10.89□□□□□ -0.67
NPC1-202ENST00000540608 METTL12A8MUP2 240 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 CDC14BO60729 498 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 MPIG6BO95866 241 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 FOLR1P15328 257 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 SLC6A9P48067 706 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 NPY4RP50391 375 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 FBXW4P57775 412 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 FOXL2P58012 376 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 CFHR1Q03591 330 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 STK11Q15831 433 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 PLEKHN1Q494U1 663 aaPredicted RBP10.88□□□□□ -0.67
NPC1-202ENST00000540608 PRSS54Q6PEW0 395 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 DRAM2Q6UX65 266 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 CLEC18BQ6UXF7 455 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 PGAP1Q75T13 922 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 OR5AS1Q8N127 324 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 TMED6Q8WW62 240 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 TMEM41AQ96HV5 264 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 SERINC1Q9NRX5 453 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 ALKBH4Q9NXW9 302 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 RPH3AQ9Y2J0 694 aaPredicted RBP10.88□□□□□ -0.67
NPC1-202ENST00000540608 FLVCR1Q9Y5Y0 555 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 A0A1W2PNV4 684 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 VSTM2BA6NLU5 285 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 ABOP16442 354 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 TMEM50BP56557 158 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 IL34Q6ZMJ4 242 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 SPAG16Q8N0X2 631 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 CARFQ8N187 725 aa10.88□□□□□ -0.67
NPC1-202ENST00000540608 D2HGDHQ8N465 521 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms