RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 LINC01006Q8NI28 216 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 LRTOMTQ8WZ04 291 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 GORASP2Q9H8Y8 452 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 SPAG4Q9NPE6 437 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 C14orf119Q9NWQ9 140 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 C1orf123Q9NWV4 160 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 KPTNQ9Y664 436 aa9.93□□□□□ -0.82
CBX3P4-202ENST00000540428 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 BHLHE40O14503 412 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 OR10H3O60404 316 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 LHBP01229 141 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 SEMG1P04279 462 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 DDOSTP39656 456 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 IER3P46695 156 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 GSSP48637 474 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 PROK1P58294 105 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 HOXA4Q00056 320 aaPredicted RBP9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 SPIBQ01892 262 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 ASPHD2Q6ICH7 369 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 RPL13AP3Q6NVV1 102 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 BTN2A1Q7KYR7 527 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 GCSAMQ8N6F7 178 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 FAM86B1Q8N7N1 296 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 BOLLQ8N9W6 283 aaKnown RBP9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 NPRL2Q8WTW4 380 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 LHX4Q969G2 390 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 CMTM5Q96DZ9 223 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 PYURFQ96I23 114 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 DDOQ99489 341 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 RBM4BQ9BQ04 359 aaKnown RBP9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 DPAGT1Q9H3H5 408 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 FN3KQ9H479 309 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 RNPEPL1Q9HAU8 725 aa9.92□□□□□ -0.82
CBX3P4-202ENST00000540428 A0A0U1RQK1 487 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 A0A1B0GVI7 797 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 A6NLC8 198 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 DVL1O14640 695 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 XRCC2O43543 280 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 IGHV4-59P01825 116 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 GYPAP02724 150 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 GRPP07492 148 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 MUC1P15941 1255 aaPredicted RBP9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 GRK5P34947 590 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 KRTAP10-3P60369 221 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 ARF6P62330 175 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 DBPQ10586 325 aaPredicted RBP9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 TSPAN31Q12999 210 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 TAF9Q16594 264 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 CDONQ4KMG0 1287 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 GLYATL3Q5SZD4 288 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 METAP1DQ6UB28 335 aaPredicted RBP9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 GDPGP1Q6ZNW5 385 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 FAM90A1Q86YD7 464 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 ZSCAN4Q8NAM6 433 aaPredicted RBP9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 SCCPDHQ8NBX0 429 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 LY6G5BQ8NDX9 201 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 OR56B2PQ8NGI1 322 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 OR2T4Q8NH00 348 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 OR2AE1Q8NHA4 323 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 GNPDA2Q8TDQ7 276 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 SPSB4Q96A44 273 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 KCNJ15Q99712 375 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 NSRP1Q9H0G5 558 aaKnown RBP9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 RASSF4Q9H2L5 321 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 CNTD2Q9H8S5 307 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 CD300AQ9UGN4 299 aa9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 RPUSD1Q9UJJ7 312 aaKnown RBP9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 CAB39Q9Y376 341 aaPredicted RBP9.91□□□□□ -0.82
CBX3P4-202ENST00000540428 hCG_1807616A0A1W2PRN6 198 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 SLC22A31A6NKX4 558 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 GPR37O15354 613 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 FCN3O75636 299 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 PRDX6P30041 224 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 PYCR1P32322 319 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 RPS27P42677 84 aaKnown RBP9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 PCK2Q16822 640 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 MICBQ29980 383 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 SLC35F1Q5T1Q4 408 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 ZNF826PQ6ZT77 177 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 SLC36A1Q7Z2H8 476 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 DCXRQ7Z4W1 244 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 ZDHHC21Q8IVQ6 265 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 PROKR2Q8NFJ6 384 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 OR52L1Q8NGH7 329 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 UBE2FQ969M7 185 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 MCUR1Q96AQ8 359 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 C12orf43Q96C57 262 aaKnown RBP9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 COPS4Q9BT78 406 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 C16orf95Q9H693 158 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 MAGEL2Q9UJ55 1249 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 CDH10Q9Y6N8 788 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 COMMD3-BMI1R4GMX3 469 aa9.9□□□□□ -0.82
CBX3P4-202ENST00000540428 C5orf63A6NC05 138 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 TVP23AA6NH52 213 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 ANKRD30BLA7E2S9 258 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 ZNF878C9JN71 531 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 TIPRLO75663 272 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 FABP3P05413 133 aa9.89□□□□□ -0.83
CBX3P4-202ENST00000540428 FBP1P09467 338 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms