RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 DOK5Q9P104 306 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 TBC1D29Q9UFV1 150 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ST6GALNAC2Q9UJ37 374 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 LOC100289279A0A1B0GTE1 492 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 A0A1W2PR48 441 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 PRAMEF27A3QJZ7 478 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 CYB5BO43169 146 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 ZNF354AO60765 605 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 B4GALT2O60909 372 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 SCRG1O75711 98 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 ZFPL1O95159 310 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 CD37P11049 281 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 HIST1H1BP16401 226 aaKnown RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 MAKP20794 623 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 AGAP20933 346 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 GNALP38405 381 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 HTR5AP47898 357 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 CD81P60033 236 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 PYY3Q5JQD4 70 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 SLC25A24Q6NUK1 477 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 ANKRD16Q6P6B7 361 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 OR2L3Q8NG85 312 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 OR4K14Q8NGD5 310 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 CNRIP1Q96F85 164 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 ABI3Q9P2A4 366 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 DHDHQ9UQ10 334 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 POMT1Q9Y6A1 747 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 IGHV1OR21-1A0A087WYE8 117 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 RNF222A6NCQ9 220 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 CD8AP01732 235 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 CRHP06850 196 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 HOXC4P09017 264 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 ZNF10P21506 573 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 TUBG1P23258 451 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 ACKR3P25106 362 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 ALDH3B1P43353 468 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 TRA2BP62995 288 aaKnown RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 REEP5Q00765 189 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 GGNBP1Q5YKI7 109 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 LEG1Q6P5S2 330 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 OR4A4PQ8NGN8 299 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 BSCL2Q96G97 398 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 LIN37Q96GY3 246 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 IP6K3Q96PC2 410 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 UTP23Q9BRU9 249 aaKnown RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 ADAM29Q9UKF5 820 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 LSM5Q9Y4Y9 91 aaKnown RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 BPTFQ12830 3046 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 UNC80Q8N2C7 3258 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 OR5H15A6NDH6 313 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 OR5H1A6NKK0 313 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 TMEM150CB9EJG8 249 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 TAAR5O14804 337 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 EIF4E2O60573 245 aaKnown RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 CTAG2O75638 210 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 CX3CR1P49238 355 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 NHLH2Q02577 135 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 SSBP1Q04837 148 aaKnown RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 ARFRP1Q13795 201 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 C2orf76Q3KRA6 126 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 MIDNQ504T8 468 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 LIPNQ5VXI9 398 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 ZNF385CQ66K41 422 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 COMTD1Q86VU5 262 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 LRRC25Q8N386 305 aaPredicted RBP7.8□□□□□ -1.16
DDB1-217ENST00000540166 ZNF283Q8N7M2 679 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 TMEM229BQ8NBD8 167 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 DMBX1Q8NFW5 382 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 SFXN5Q8TD22 340 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 DTD1Q8TEA8 209 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 PTCHD1Q96NR3 888 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 GPR61Q9BZJ8 451 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 RNF122Q9H9V4 155 aa7.8□□□□□ -1.16
DDB1-217ENST00000540166 A0A087WV62 115 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 TEX13DA0A0J9YY54 714 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 JTBO76095 146 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 WNT11O96014 354 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 IGHEP01854 428 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 CD74P04233 296 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 DBIP07108 87 aaKnown RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 HOXA5P20719 270 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 HTR2CP28335 458 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 RTP5Q14D33 572 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ALG10BQ5I7T1 473 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 DRAM2Q6UX65 266 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 THSD4Q6ZMP0 1018 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 LSRQ86X29 649 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 NMNAT3Q96T66 252 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ARHGDIGQ99819 225 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 RAB11FIP5Q9BXF6 653 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 METTL9Q9H1A3 318 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 KLF15Q9UIH9 416 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 SLC17A4Q9Y2C5 497 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 AMDHD2Q9Y303 409 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ANAPC1Q9H1A4 1944 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 IDSB3KWA1 339 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 CRTAPO75718 401 aaPredicted RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 BTF3P20290 206 aaKnown RBP7.79□□□□□ -1.16
DDB1-217ENST00000540166 GABRA3P34903 492 aa7.79□□□□□ -1.16
DDB1-217ENST00000540166 ZNHIT3Q15649 155 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms