RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 ISG15P05161 165 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 H2BFMP0C1H6 154 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 POLR2GP62487 172 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 S100A12P80511 92 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 HGFACQ04756 655 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 C16orf47Q6ZP98 133 aaPredicted RBP12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 GPBAR1Q8TDU6 330 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 ADIPOR1Q96A54 375 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 PTX4Q96A99 478 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 SULT4A1Q9BR01 284 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 RTBDNQ9BSG5 229 aaPredicted RBP12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 SEC61A2Q9H9S3 476 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 TAF9BQ9HBM6 251 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 NIT2Q9NQR4 276 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 FLVCR1Q9Y5Y0 555 aa12.37□□□□□ -0.43
SCNN1A-215ENST00000540037 SYT7O43581 403 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 IFNA4P05014 189 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 SFTPBP07988 381 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 GP1BBP13224 206 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 OR3A4PP47883 348 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 CLDN6P56747 220 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 ECH1Q13011 328 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 TMEM151BQ8IW70 566 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 NKAIN3Q8N8D7 197 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 IP6K3Q96PC2 410 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 GABRG3Q99928 467 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 LPAR5Q9H1C0 372 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 DUSP15Q9H1R2 295 aaPredicted RBP12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 RPS10P5Q9NQ39 176 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 RPH3AQ9Y2J0 694 aaPredicted RBP12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 TNFRSF10CO14798 259 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 NSA2O95478 260 aaKnown RBP12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 CSTBP04080 98 aaKnown RBP12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 FCGR3AP08637 254 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 IL12BP29460 328 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 TMEM50BP56557 158 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 HSD17B7P56937 341 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 SPEM2Q0P670 501 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 GLIPR1L1Q6UWM5 242 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 SLC22A24Q8N4F4 322 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 OR51E1Q8TCB6 317 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 ST6GALNAC5Q9BVH7 336 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 TBL1XR1Q9BZK7 514 aa12.36□□□□□ -0.43
SCNN1A-215ENST00000540037 ARPC4-TTLL3A0A0A6YYG9 625 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 MED19A0JLT2 244 aaPredicted RBP12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 FAM157AC9JC47 383 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 SFT2D2O95562 160 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 TNFP01375 233 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 ZNF93P35789 620 aaPredicted RBP12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 TMEM244Q5VVB8 128 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 ZNF704Q6ZNC4 412 aaPredicted RBP12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 GALNTL5Q7Z4T8 443 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 PPP1R3BQ86XI6 285 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 NUDT22Q9BRQ3 303 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 FAM206AQ9NX38 181 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 WBP1LQ9NX94 342 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 OBP2AQ9NY56 170 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 PMS2P1A4D2B8 440 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 C5orf52A6NGY3 159 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 A6NLC8 198 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 NPIPB7O75200 414 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 KNG1P01042 644 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 PTAFRP25105 342 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 SLC6A9P48067 706 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 SLC26A5P58743 744 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 RAB5BP61020 215 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 SMCO1Q147U7 214 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 EIF2S3LQ2VIR3 472 aaKnown RBP12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 FAM76BQ5HYJ3 339 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 TMEM92Q6UXU6 159 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 OR10S1Q8NGN2 331 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 OR13G1Q8NGZ3 307 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 ARHGAP5-AS1Q96IT6 56 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 AQP10Q96PS8 301 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 SHISA8B8ZZ34 492 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 MS4A18H0YCH9 400 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 CD5P06127 495 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 SNRNP70P08621 437 aaKnown RBP12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 RD3LP0DJH9 198 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 GFERP55789 205 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 CYCSP99999 105 aaKnown RBP12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 MS4A18Q3C1V0 323 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 COMMD2Q86X83 199 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 LINC00469Q8N7U9 141 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 OR5D18Q8NGL1 313 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 KIRREL1Q96J84 757 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 SLC26A1Q9H2B4 701 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 ZNF304Q9HCX3 659 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 LANCL2Q9NS86 450 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
SCNN1A-215ENST00000540037 LRP4O75096 1905 aa12.34□□□□□ -0.43
SCNN1A-215ENST00000540037 TMEM131Q92545 1883 aa12.34□□□□□ -0.43
SCNN1A-215ENST00000540037 hCG_1809904A0A1W2PP81 198 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms