RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 LSM8O95777 96 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 HLA-AP01891 365 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 CATP04040 527 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 CDK1P06493 297 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 SNRPAP09012 282 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 HOXD4P09016 255 aaPredicted RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 GNAO1P09471 354 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 CDH1P12830 882 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ATP6V1B2P21281 511 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ME2P23368 584 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 HCAR3P49019 387 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RND3P61587 244 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RPS14P62263 151 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 DHODHQ02127 395 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 TLE4Q04727 773 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 STX4Q12846 297 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ASAH1Q13510 395 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 GPNMBQ14956 572 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ABRAXAS2Q15018 415 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RFX4Q33E94 735 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 TMEM176BQ3YBM2 270 aaPredicted RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 SIRPB2Q5JXA9 342 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 OGFRL1Q5TC84 451 aaPredicted RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 OR52E8Q6IFG1 317 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ANKRD26P1Q6NSI1 321 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 FAM199XQ6PEV8 388 aaPredicted RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 CCDC121Q6ZUS5 278 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ACOT7LQ6ZUV0 252 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 SMIM15Q7Z3B0 74 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 NAXDQ8IW45 347 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 BBS7Q8IWZ6 715 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 SLC22A15Q8IZD6 547 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 PDIK1LQ8N165 341 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RIBC1Q8N443 379 aaPredicted RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 EID2Q8N6I1 236 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 OR5L1Q8NGL2 311 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 CXorf40AQ8TE69 158 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 DGCR14Q96DF8 476 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RAB3CQ96E17 227 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RCHY1Q96PM5 261 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 HBEGFQ99075 208 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 FAM173AQ9BQD7 235 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RHNO1Q9BSD3 238 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 TMEM59Q9BXS4 323 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 MRPS26Q9BYN8 205 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 BARHL1Q9BZE3 327 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 NAT10Q9H0A0 1025 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 METTL9Q9H1A3 318 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 DHX35Q9H5Z1 703 aaKnown RBP3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 TMBIM4Q9HC24 238 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 BATF3Q9NR55 127 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 EXD2Q9NVH0 621 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 SDHAF2Q9NX18 166 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 PRODH2Q9UF12 536 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 OPN4Q9UHM6 478 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 KCNG2Q9UJ96 466 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 GUCA1BQ9UMX6 200 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ERVW-1Q9UQF0 538 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 SNX24Q9Y343 169 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 ACANP16112 2415 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 CSPG4Q6UVK1 2322 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 PATJQ8NI35 1801 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RTTNQ86VV8 2226 aa3.16□□□□□ -1.9
AC055720.1-201ENST00000539552 RTL1A6NKG5 1358 aa3.15□□□□□ -1.9
AC055720.1-201ENST00000539552 MYO10Q9HD67 2058 aa3.15□□□□□ -1.9
AC055720.1-201ENST00000539552 NBASA2RRP1 2371 aa3.15□□□□□ -1.9
AC055720.1-201ENST00000539552 ARID2Q68CP9 1835 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 IGLV5-45A0A087WSX0 123 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 IGLV5-52A0A0A0MRZ9 124 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 A0A0B4J2E0 115 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 IQCMA0A1B0GVH7 501 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 A0A1B0GX12 115 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 GNG14A0A1W2PPG7 69 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF233A6NK53 670 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 OR2AT4A6NND4 320 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 RNF212BA8MTL3 300 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 HACD1B0YJ81 288 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 C9J4A7 227 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CCL21O00585 134 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SOCS2O14508 198 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 MRPS12O15235 138 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 DUSP11O75319 330 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SNAPINO95295 136 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 MPZL1O95297 269 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 OXTP01178 125 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SERPINA5P05154 406 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ACSM4P0C7M7 580 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 C8orf88P0DMB2 117 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CSNK2A2P19784 350 aaPredicted RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 TGFBR2P37173 567 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 RBMXP38159 391 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CD79BP40259 229 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ELK3P41970 407 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 IDH3GP51553 393 aaPredicted RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CAV2P51636 162 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 HNRNPA3P51991 378 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 RPL31P62899 125 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 RPL24P83731 157 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms