RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 RFC3P40938 356 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 POU3F1Q03052 451 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 TLE3Q04726 772 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 PJVKQ0ZLH3 352 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 H3F3CQ6NXT2 135 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 COX15Q7KZN9 410 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 KCNG3Q8TAE7 436 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 TMED6Q8WW62 240 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 SAT2Q96F10 170 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 C1orf147Q96MC9 270 aaPredicted RBP8.58□□□□□ -1.04
CDH13-204ENST00000539548 AQP10Q96PS8 301 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 NICN1Q9BSH3 213 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 ZNF304Q9HCX3 659 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 FANCFQ9NPI8 374 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 UQCC1Q9NVA1 299 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 MED29Q9NX70 200 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 CTSFQ9UBX1 484 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 FLVCR1Q9Y5Y0 555 aa8.58□□□□□ -1.04
CDH13-204ENST00000539548 KNL1Q8NG31 2342 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 HEXAP06865 529 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 GLULP15104 373 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 NME1P15531 152 aaKnown RBP8.57□□□□□ -1.04
CDH13-204ENST00000539548 ZNF20P17024 532 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 LAP3P28838 519 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 FAM189A2Q15884 450 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 PLAC9Q5JTB6 97 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 GLIPR1L1Q6UWM5 242 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 CLEC18BQ6UXF7 455 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 TMPPEQ6ZT21 453 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 PEG10Q86TG7 708 aaKnown RBP8.57□□□□□ -1.04
CDH13-204ENST00000539548 RTN4RL2Q86UN3 420 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 ZNF101Q8IZC7 436 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 OR5AS1Q8N127 324 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 LMX1AQ8TE12 382 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 RAB3CQ96E17 227 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 ADAT1Q9BUB4 502 aaKnown RBP8.57□□□□□ -1.04
CDH13-204ENST00000539548 TREM1Q9NP99 234 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 DNAJB11Q9UBS4 358 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 LPAR3Q9UBY5 353 aa8.57□□□□□ -1.04
CDH13-204ENST00000539548 MRPS28Q9Y2Q9 187 aaKnown RBP8.57□□□□□ -1.04
CDH13-204ENST00000539548 ARID1BQ8NFD5 2236 aaPredicted RBP8.57□□□□□ -1.04
CDH13-204ENST00000539548 PCP4L1A6NKN8 68 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SOCS1O15524 211 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 HIST1H1DP16402 221 aaKnown RBP8.56□□□□□ -1.04
CDH13-204ENST00000539548 FPR2P25090 351 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 CBX5P45973 191 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 NPY4RP50391 375 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 RAB13P51153 203 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SUMO3P55854 103 aaPredicted RBP8.56□□□□□ -1.04
CDH13-204ENST00000539548 TMEM50BP56557 158 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 HSD11B2P80365 405 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 C17orf67Q0P5P2 114 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 NSUN5P2Q63ZY6 315 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 RNF144BQ7Z419 303 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 CBLN2Q8IUK8 224 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 TMEM104Q8NE00 496 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 OR1L3Q8NH93 324 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 NUBPLQ8TB37 319 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 OR51E1Q8TCB6 317 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 WNT2BQ93097 391 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 DDIT4LQ96D03 193 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 C2orf50Q96LR7 162 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 RTBDNQ9BSG5 229 aaPredicted RBP8.56□□□□□ -1.04
CDH13-204ENST00000539548 MRPL13Q9BYD1 178 aaKnown RBP8.56□□□□□ -1.04
CDH13-204ENST00000539548 VN1R1Q9GZP7 353 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 MOB1AQ9H8S9 216 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 BIN3Q9NQY0 253 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 B3GALT5Q9Y2C3 310 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 EXPH5Q8NEV8 1989 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SEC16AO15027 2179 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 PQLC2LA1A4F0 135 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 MSGN1A6NI15 193 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 LIPT2A6NK58 231 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ZNF705EA8MWA4 302 aaPredicted RBP8.56□□□□□ -1.04
CDH13-204ENST00000539548 CDC14BO60729 498 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ADAP1O75689 374 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 MPIG6BO95866 241 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ABOP16442 354 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 BCKDHBP21953 392 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 BIDP55957 195 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SUPT4H1P63272 117 aaKnown RBP8.56□□□□□ -1.04
CDH13-204ENST00000539548 DLX2Q07687 328 aaPredicted RBP8.56□□□□□ -1.04
CDH13-204ENST00000539548 IL15RAQ13261 267 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SLC9A3R2Q15599 337 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ZNF528Q3MIS6 628 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 THEM4Q5T1C6 240 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ZNF585AQ6P3V2 769 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 OGFOD3Q6PK18 319 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 TMPRSS9Q7Z410 1059 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 LHFPL1Q86WI0 220 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 PLPP5Q8NEB5 264 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 OR56B1Q8NGI3 324 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ADAMTS17Q8TE56 1095 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 ROBO4Q8WZ75 1007 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 TMEM41AQ96HV5 264 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SMIM8Q96KF7 97 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 C5orf34Q96MH7 638 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SLC5A7Q9GZV3 580 aa8.56□□□□□ -1.04
CDH13-204ENST00000539548 SLC26A1Q9H2B4 701 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms