RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC6A15Q9H2J7 730 aa15.1■□□□□ 0.01
PCDHB17P-201ENST00000539533 PFDN2Q9UHV9 154 aa15.1■□□□□ 0.01
PCDHB17P-201ENST00000539533 KLRC4-KLRK1H3BQV0 150 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 TEX46H3BTG2 121 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 PHYHO14832 338 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 LPLP06858 475 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 HIST3H3Q16695 136 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 CLVS2Q5SYC1 327 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 SFRP5Q5T4F7 317 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 STPG2Q8N412 459 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 ZIC4Q8N9L1 334 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 C11orf40Q8WZ69 217 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 ST8SIA2Q92186 375 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 ZNF845Q96IR2 970 aaPredicted RBP15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 OR8B4Q96RC9 309 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 ELOVL3Q9HB03 270 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 FRRS1LQ9P0K9 344 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 A8MXK9 166 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 EFSO43281 561 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 GLSO94925 669 aaPredicted RBP15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 NMBP08949 121 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 QDPRP09417 244 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 CDAP32320 146 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 MNDAP41218 407 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 ZNF766Q5HY98 468 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 CORO6Q6QEF8 472 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 STAC2Q6ZMT1 411 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 TCF7L1Q9HCS4 588 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 MED9Q9NWA0 146 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 KLK13Q9UKR3 277 aa15.09■□□□□ 0.01
PCDHB17P-201ENST00000539533 PHF3Q92576 2039 aaKnown RBP15.08■□□□□ 0
PCDHB17P-201ENST00000539533 DNPH1O43598 174 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 ITGB2P05107 769 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 SPINK2P20155 84 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 B2MP61769 119 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 HLXQ14774 488 aaPredicted RBP15.08■□□□□ 0
PCDHB17P-201ENST00000539533 SLC25A47Q6Q0C1 308 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 OR52B4Q8NGK2 314 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 SEC61A2Q9H9S3 476 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 ETV7Q9Y603 341 aa15.08■□□□□ 0
PCDHB17P-201ENST00000539533 PYCARD-AS1I3L0S3 204 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 B3GALNT1O75752 331 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ADRA2CP18825 462 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 LAP3P28838 519 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 LHX2P50458 406 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 TNFSF10P50591 281 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 SEC61A1P61619 476 aaKnown RBP15.07■□□□□ 0
PCDHB17P-201ENST00000539533 PPIAP62937 165 aaKnown RBP15.07■□□□□ 0
PCDHB17P-201ENST00000539533 SRYQ05066 204 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ALKBH1Q13686 389 aaKnown RBP15.07■□□□□ 0
PCDHB17P-201ENST00000539533 PCK2Q16822 640 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 RSPO4Q2I0M5 234 aaPredicted RBP15.07■□□□□ 0
PCDHB17P-201ENST00000539533 PHYHD1Q5SRE7 291 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ALKAL2Q6UX46 152 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 DCXRQ7Z4W1 244 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF679Q8IYX0 411 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 DNAAF1Q8NEP3 725 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 C15orf40Q8WUR7 153 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ASB17Q8WXJ9 295 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF416Q9BWM5 594 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 SLITRK2Q9H156 845 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF891A8MT65 544 aaPredicted RBP15.07■□□□□ 0
PCDHB17P-201ENST00000539533 TMIGD3P0DMS9 266 aaPredicted RBP15.07■□□□□ 0
PCDHB17P-201ENST00000539533 S100A11P31949 105 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 NTF4P34130 210 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 Q499Y3 187 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 TEX30Q5JUR7 227 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 KRT77Q7Z794 578 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF454Q8N9F8 522 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ZFP62Q8NB50 900 aaPredicted RBP15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF407Q9C0G0 2248 aa15.07■□□□□ 0
PCDHB17P-201ENST00000539533 ARPC5O15511 151 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 TLX3O43711 291 aaPredicted RBP15.06■□□□□ 0
PCDHB17P-201ENST00000539533 RP2O75695 350 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF432O94892 652 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 VSIG10L2P0DP72 767 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 ROM1Q03395 351 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 HYAL4Q2M3T9 481 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 OR7E24Q6IFN5 339 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 KCTD18Q6PI47 426 aaPredicted RBP15.06■□□□□ 0
PCDHB17P-201ENST00000539533 PLXDC2Q6UX71 529 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 DNM1P46Q6ZS02 220 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 TMUB2Q71RG4 321 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 PRSS35Q8N3Z0 413 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 OR6N1Q8NGY5 312 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 OR2G2Q8NGZ5 317 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 OR52N5Q8NH56 324 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 LILRB1Q8NHL6 650 aaPredicted RBP15.06■□□□□ 0
PCDHB17P-201ENST00000539533 ST7LQ8TDW4 575 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 PNPLA2Q96AD5 504 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 PCDHB16Q9NRJ7 776 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 OPN4Q9UHM6 478 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 ATPIF1Q9UII2 106 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 ZNF175Q9Y473 711 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 LINC01387J3KSC0 135 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 SOX2P48431 317 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 CLDN18P56856 261 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 ODF4Q2M2E3 257 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 RNFT1Q5M7Z0 435 aa15.06■□□□□ 0
PCDHB17P-201ENST00000539533 TMEM123Q8N131 208 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms