RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 BRD7Q9NPI1 651 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 OAZ3Q9UMX2 235 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 PCDHB10Q9UN67 800 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 DYSFO75923 2080 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 SVEP1Q4LDE5 3571 aa13.17□□□□□ -0.3
CIT-210ENST00000539413 ZAR1LA6NP61 321 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 PHF1O43189 567 aaPredicted RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 PNPP00491 289 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 MRPL3P09001 348 aaKnown RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 ALOX5APP20292 161 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 GATA4P43694 442 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 SEC61A1P61619 476 aaKnown RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 LCN2P80188 198 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 FAM3AP98173 230 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 MPPED2Q15777 294 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 ZNF181Q2M3W8 571 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 FAM201AQ5SY85 155 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 C12orf73Q69YU5 71 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 LRRN1Q6UXK5 716 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 KLHL36Q8N4N3 616 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 CELF2-AS1Q8N7Q2 184 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 TCEANCQ8N8B7 351 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 CENPNQ96H22 339 aaPredicted RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 PRRG3Q9BZD7 231 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 SP140LQ9H930 580 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 PATZ1Q9HBE1 687 aaKnown RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 UFSP2Q9NUQ7 469 aa13.16□□□□□ -0.3
CIT-210ENST00000539413 MRPL15Q9P015 296 aaKnown RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 FBN1P35555 2871 aaKnown RBP13.16□□□□□ -0.3
CIT-210ENST00000539413 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.15□□□□□ -0.35e-6■■■■□ 22.8
CIT-210ENST00000539413 SAC3D1A6NKF1 404 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 GMDSO60547 372 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 AVPP01185 164 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 ZFP36P26651 326 aaKnown RBP13.15□□□□□ -0.3
CIT-210ENST00000539413 THBS2P35442 1172 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
CIT-210ENST00000539413 MDH2P40926 338 aaKnown RBP13.15□□□□□ -0.3
CIT-210ENST00000539413 ACTR3P61158 418 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 EFNB1P98172 346 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 KPNB1Q14974 876 aaKnown RBP13.15□□□□□ -0.3
CIT-210ENST00000539413 GFOD2Q3B7J2 385 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 LCN1P1Q5VSP4 162 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
CIT-210ENST00000539413 OR52H1Q8NGJ2 320 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 PGAM5Q96HS1 289 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 TMPRSS13Q9BYE2 586 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 YIPF3Q9GZM5 350 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 TMEM165Q9HC07 324 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 LAMP5Q9UJQ1 280 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 NOP16Q9Y3C1 178 aaKnown RBP13.15□□□□□ -0.3
CIT-210ENST00000539413 LRP12Q9Y561 859 aa13.15□□□□□ -0.3
CIT-210ENST00000539413 PPIAL4EA0A075B759 164 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 A0A0G2JMP0 313 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 A0A0X1KG70 313 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 hCG_38984A0A1B0GV85 526 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 LRRC30A6NM36 301 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 CEACAM18A8MTB9 384 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 F5H0A9 414 aaPredicted RBP13.14□□□□□ -0.31
CIT-210ENST00000539413 PPIAL4DF5H284 164 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 PSMD9O00233 223 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 FAM20BO75063 409 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 PPIAL4FP0DN26 164 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 DDOSTP39656 456 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 PSMA6P60900 246 aaKnown RBP13.14□□□□□ -0.31
CIT-210ENST00000539413 HOXA4Q00056 320 aaPredicted RBP13.14□□□□□ -0.31
CIT-210ENST00000539413 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
CIT-210ENST00000539413 AADACL4Q5VUY2 407 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 MEPCEQ7L2J0 689 aaKnown RBP13.14□□□□□ -0.31
CIT-210ENST00000539413 KRT77Q7Z794 578 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 MUC20Q8N307 709 aaPredicted RBP13.14□□□□□ -0.31
CIT-210ENST00000539413 OR4M2Q8NGB6 313 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 TMEM163Q8TC26 289 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 Q8TCH9 128 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 ERGIC1Q969X5 290 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 IL4I1Q96RQ9 567 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 PKP2Q99959 881 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 OSBPL10Q9BXB5 764 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 COPS3Q9UNS2 423 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 PPIAL4AQ9Y536 164 aa13.14□□□□□ -0.31
CIT-210ENST00000539413 LOC105371242A0A075B767 164 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 ANKRD30BLA7E2S9 258 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 PRR32B1ATL7 298 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 H3BNX3 289 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 FOXH1O75593 365 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 PTBP3O95758 552 aaKnown RBP13.13□□□□□ -0.31
CIT-210ENST00000539413 WNT2P09544 360 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 IRF2P14316 349 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 CFL1P23528 166 aaKnown RBP13.13□□□□□ -0.31
CIT-210ENST00000539413 GSK3AP49840 483 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 NXNL2Q5VZ03 156 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 RFLNBQ8N5W9 214 aa13.13□□□□□ -0.31
CIT-210ENST00000539413 C19orf18Q8NEA5 215 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms