RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CBR3O75828 277 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 NDUFB6O95139 128 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 LAP3P28838 519 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 S100A11P31949 105 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 EIF1AXP47813 144 aaKnown RBP9.5□□□□□ -0.89
CLIP1-210ENST00000538120 TAS2R20P59543 309 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 RAP2BP61225 183 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 SEC61A1P61619 476 aaKnown RBP9.5□□□□□ -0.89
CLIP1-210ENST00000538120 ACER2Q5QJU3 275 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 CARD17Q5XLA6 110 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 OLFML2AQ68BL7 652 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 TMUB2Q71RG4 321 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 OR52H1Q8NGJ2 320 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 OR10S1Q8NGN2 331 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 RNF133Q8WVZ7 376 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 NKX3-1Q99801 234 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-210ENST00000538120 EDEM2Q9BV94 578 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 FXYD6Q9H0Q3 95 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 SLITRK2Q9H156 845 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 OPN4Q9UHM6 478 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 NCOR1O75376 2440 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 LOC101059948A0A1B0GTJ6 334 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 A8MXK9 166 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 IGHG1P01857 330 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 MAS1P04201 325 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 CLRN1P58418 232 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 AP3S2P59780 193 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 BAMBIQ13145 260 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 HYAL4Q2M3T9 481 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 RAET1LQ5VY80 246 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 FAM122CQ6P4D5 195 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 WDR73Q6P4I2 378 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 LRFN4Q6PJG9 635 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 DHRS13Q6UX07 377 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 ASB5Q8WWX0 329 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 HAVCR1Q96D42 359 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 GPR160Q9UJ42 338 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 DKKL1Q9UK85 242 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 EMC9Q9Y3B6 208 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 FREM3P0C091 2139 aa9.5□□□□□ -0.89
CLIP1-210ENST00000538120 A0A0J9YW62 118 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 TUBAL3A6NHL2 446 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 LRRC3CA6NJW4 275 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 DOK2O60496 412 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 CALCBP10092 127 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF35P13682 527 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF17P17021 662 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF43P17038 809 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 CDAP32320 146 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF273Q14593 569 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 ZNF124Q15973 351 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 DEGS2Q6QHC5 323 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 BEST3Q8N1M1 668 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 KCNK15Q9H427 330 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 TMEM9BQ9NQ34 198 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 DEPPQ9NTK1 212 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 OR52A1Q9UKL2 312 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 MRPS18BQ9Y676 258 aaKnown RBP9.49□□□□□ -0.89
CLIP1-210ENST00000538120 SDK2Q58EX2 2172 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 IGHV3-15A0A0B4J1V0 119 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 TOR1AO14656 332 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 RP2O75695 350 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 RLN1P04808 185 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 RFPL3SP0C7P2 107 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 GABRA1P14867 456 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 DLSTP36957 453 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 PCGF3Q3KNV8 242 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 SLC36A1Q7Z2H8 476 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 RELL2Q8NC24 303 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-210ENST00000538120 OR1S1Q8NH92 325 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 TSEN15Q8WW01 171 aaKnown RBP9.49□□□□□ -0.89
CLIP1-210ENST00000538120 SLAMF6Q96DU3 332 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 CDC6Q99741 560 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 TMPRSS13Q9BYE2 586 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 CHST6Q9GZX3 395 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 CENPMQ9NSP4 180 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 LHFPL6Q9Y693 200 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 MED12Q93074 2177 aa9.49□□□□□ -0.89
CLIP1-210ENST00000538120 TMEM272A0A1B0GTI8 110 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 PINLYPA6NC86 204 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 ACOT7O00154 380 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 EIF1AYO14602 144 aaKnown RBP9.48□□□□□ -0.89
CLIP1-210ENST00000538120 GOSR2O14653 212 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 SPDEFO95238 335 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 P04436 131 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 QDPRP09417 244 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 IGFBP3P17936 291 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-210ENST00000538120 CFPP27918 469 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 EFNB2P52799 333 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 ART1P52961 327 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 CLDN17P56750 224 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 SPEM2Q0P670 501 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 PHYHD1Q5SRE7 291 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 TFAP2EQ6VUC0 442 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 OVCH2Q7RTZ1 564 aa9.48□□□□□ -0.89
CLIP1-210ENST00000538120 YRDCQ86U90 279 aaKnown RBP9.48□□□□□ -0.89
CLIP1-210ENST00000538120 MUC20Q8N307 709 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms