RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TMEM100Q9NV29 134 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 USE1Q9NZ43 259 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 DNAJC27Q9NZQ0 273 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 KIF17Q9P2E2 1029 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 AASSQ9UDR5 926 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 N6AMT1Q9Y5N5 214 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 NPTNQ9Y639 398 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 PKD1L1Q8TDX9 2849 aa7.06□□□□□ -1.28
SPARC-208ENST00000538026 hCG_38984A0A1B0GV85 526 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 CLDN25C9JDP6 229 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 F5H0A9 414 aaPredicted RBP7.05□□□□□ -1.28
SPARC-208ENST00000538026 TRAPPC2LH3BP13 241 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 EBAG9O00559 213 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 EI24O14681 340 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 TNFRSF13BO14836 293 aaPredicted RBP7.05□□□□□ -1.28
SPARC-208ENST00000538026 PLPP2O43688 288 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 IGLV3-1P01715 115 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 LYNP07948 512 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 SBK2P0C263 348 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 PAICSP22234 425 aaKnown RBP7.05□□□□□ -1.28
SPARC-208ENST00000538026 CD200P41217 278 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 GATA4P43694 442 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 GSK3AP49840 483 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 DVL1P1P54792 670 aaPredicted RBP7.05□□□□□ -1.28
SPARC-208ENST00000538026 GRB2P62993 217 aaKnown RBP7.05□□□□□ -1.28
SPARC-208ENST00000538026 SRSF2Q01130 221 aaKnown RBP7.05□□□□□ -1.28
SPARC-208ENST00000538026 ROM1Q03395 351 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 FAM57BQ71RH2 274 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 ZNF771Q7L3S4 317 aaPredicted RBP7.05□□□□□ -1.28
SPARC-208ENST00000538026 ZNF454Q8N9F8 522 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 C19orf18Q8NEA5 215 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 OR8B12Q8NGG6 310 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 THEM6Q8WUY1 208 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 EME1Q96AY2 570 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 TTTY10Q9BZA0 68 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 YIPF3Q9GZM5 350 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 TOR3AQ9H497 397 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 S100A14Q9HCY8 104 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 MMP26Q9NRE1 261 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 HIF1ANQ9NWT6 349 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 FAM206AQ9NX38 181 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 OPN4Q9UHM6 478 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 PPP1R3CQ9UQK1 317 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 LRP12Q9Y561 859 aa7.05□□□□□ -1.28
SPARC-208ENST00000538026 B4DSR2 109 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 J3QRE1 110 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 FAM20BO75063 409 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 APOL3O95236 402 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 ANXA2P07355 339 aaKnown RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 MSMBP08118 114 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 H2BFMP0C1H6 154 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 FAM157CP0CG43 387 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 GABRB1P18505 474 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 BTG1P62324 171 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 ELF3P78545 371 aaPredicted RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 PAX2Q02962 417 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 MFGE8Q08431 387 aaPredicted RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 MALLQ13021 153 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 TAF13Q15543 124 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 ZIK1Q3SY52 487 aaPredicted RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 CHRFAM7AQ494W8 412 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 ZMAT1Q5H9K5 638 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 ZNF684Q5T5D7 378 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 NXNL2Q5VZ03 156 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 PLEKHG7Q6ZR37 379 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 ZNF826PQ6ZT77 177 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 KRT74Q7RTS7 529 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 MRPL21Q7Z2W9 205 aaKnown RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 CBR4Q8N4T8 237 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 Q8TCH9 128 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 SPRYD4Q8WW59 207 aaPredicted RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 RAB1CQ92928 201 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 DACT3Q96B18 629 aaPredicted RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 TMEM186Q96B77 213 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 REEP6Q96HR9 211 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 PLEKHA8Q96JA3 519 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 OR8B4Q96RC9 309 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 APOL4Q9BPW4 351 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 RBM4BQ9BQ04 359 aaKnown RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 TMPRSS13Q9BYE2 586 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 RIBC2Q9H4K1 309 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 METTL17Q9H7H0 456 aaPredicted RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 HAO2Q9NYQ3 351 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 MRPL15Q9P015 296 aaKnown RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 MRM2Q9UI43 246 aaKnown RBP7.04□□□□□ -1.28
SPARC-208ENST00000538026 CDC42EP3Q9UKI2 254 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 KCNS2Q9ULS6 477 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 RHBDD3Q9Y3P4 386 aa7.04□□□□□ -1.28
SPARC-208ENST00000538026 A0A1B0GTI1 187 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 GGT3PA6NGU5 568 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 CEACAM18A8MTB9 384 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 ANKRD65E5RJM6 399 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.03□□□□□ -1.28
SPARC-208ENST00000538026 TBX1O43435 398 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 LHBP01229 141 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 WNT2P09544 360 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 EGR1P18146 543 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 TNFRSF1AP19438 455 aa7.03□□□□□ -1.28
SPARC-208ENST00000538026 TNFSF4P23510 183 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms