RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 P2RY4P51582 365 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SLC7A2P52569 658 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 DSCR4P56555 118 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 MTPNP58546 118 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SEC61BP60468 96 aaKnown RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 HERV-K104P61576 105 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 H3F3AP84243 136 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 LGALS3BPQ08380 585 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TRAP1Q12931 704 aaKnown RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 FOXF1Q12946 379 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 BNIP2Q12982 314 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 MAB21L1Q13394 359 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ART3Q13508 389 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 COTL1Q14019 142 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 OPCMLQ14982 345 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 QPRTQ15274 297 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SPHARQ15513 63 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TSC22D1Q15714 1073 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 BCL2A1Q16548 175 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TMEM176BQ3YBM2 270 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 MIDNQ504T8 468 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SLC25A53Q5H9E4 307 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 MRPL2Q5T653 305 aaKnown RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 C10orf25Q5T742 122 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 WLSQ5T9L3 541 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 METTL11BQ5VVY1 283 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 PLCXD3Q63HM9 321 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ASPHD2Q6ICH7 369 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 NANOGP8Q6NSW7 305 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.21□□□□□ -2.067e-7■■■□□ 18.2
TNFRSF1A-210ENST00000537842 DEF8Q6ZN54 512 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ZNF836Q6ZNA1 936 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 LRRC74BQ6ZQY2 392 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 NUFIP2Q7Z417 695 aaKnown RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 NET1Q7Z628 596 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 DND1Q8IYX4 353 aaKnown RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 GTPBP8Q8N3Z3 284 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ZIC4Q8N9L1 334 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SMYD1Q8NB12 490 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 OR5W2Q8NH69 310 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 KCNG3Q8TAE7 436 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 FNDC9Q8TBE3 224 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ZPLD1Q8TCW7 415 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 RNF128Q8TEB7 428 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 NRGNQ92686 78 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 OSTF1Q92882 214 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 STMN2Q93045 179 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SLC38A4Q969I6 547 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ERGIC1Q969X5 290 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TMEM45BQ96B21 275 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TAMM41Q96BW9 452 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 LRRC58Q96CX6 371 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TMEM19Q96HH6 336 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ITCHQ96J02 903 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SLC35G5Q96KT7 338 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ZNF597Q96LX8 424 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 PRRC1Q96M27 445 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 RNF145Q96MT1 663 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ZNF583Q96ND8 569 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TRNT1Q96Q11 434 aaKnown RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 PANX1Q96RD7 426 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 CGREF1Q99674 301 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 GFI1Q99684 422 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ALKBH7Q9BT30 221 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 CHRDL1Q9BU40 450 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 RBM24Q9BX46 236 aaKnown RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 LAT2Q9GZY6 243 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 FAM234AQ9H0X4 552 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 LIME1Q9H400 295 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 MTHFD2LQ9H903 347 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 NANOGQ9H9S0 305 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 RNF122Q9H9V4 155 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 CALHM2Q9HA72 323 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 BCL2L10Q9HD36 194 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 A4GALTQ9NPC4 353 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 CTPS2Q9NRF8 586 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 UBQLN4Q9NRR5 601 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ACER3Q9NUN7 267 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 QPCTLQ9NXS2 382 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 UBAP1Q9NZ09 502 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 KLRF1Q9NZS2 232 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 P2RX2Q9UBL9 471 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SEC14L4Q9UDX3 406 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 CD300AQ9UGN4 299 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 IKZF2Q9UKS7 526 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 BOKQ9UMX3 212 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 FAF1Q9UNN5 650 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ABCG2Q9UNQ0 655 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 B3GALT5Q9Y2C3 310 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 SPIN1Q9Y657 262 aaPredicted RBP2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 FKBP7Q9Y680 259 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 ABCA1O95477 2261 aa2.21□□□□□ -2.06
TNFRSF1A-210ENST00000537842 HCFC1P51610 2035 aa2.2□□□□□ -2.06
TNFRSF1A-210ENST00000537842 NBEAL1Q6ZS30 2694 aa2.2□□□□□ -2.06
TNFRSF1A-210ENST00000537842 A0A0U1RQV5 110 aa2.2□□□□□ -2.06
TNFRSF1A-210ENST00000537842 A0A1B0GUH1 482 aa2.2□□□□□ -2.06
TNFRSF1A-210ENST00000537842 IQCMA0A1B0GVH7 501 aa2.2□□□□□ -2.06
TNFRSF1A-210ENST00000537842 A0A1W2PNV4 684 aa2.2□□□□□ -2.06
TNFRSF1A-210ENST00000537842 TMEM72A0PK05 275 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms