RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 OR4D9Q8NGE8 314 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 ANKRD9Q96BM1 317 aaPredicted RBP9.05□□□□□ -0.96
GGA3-201ENST00000537686 REEP6Q96HR9 211 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 MED18Q9BUE0 208 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
GGA3-201ENST00000537686 PMS2P1A4D2B8 440 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 OR6C6A6NF89 314 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 TOR1AO14656 332 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 XRCC2O43543 280 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 GPANK1O95872 356 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 SNRNP70P08621 437 aaKnown RBP9.05□□□□□ -0.96
GGA3-201ENST00000537686 CCL4P13236 92 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 MGMTP16455 207 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 GABRB1P18505 474 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 ATF1P18846 271 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 CDKN2AP42771 156 aaKnown RBP9.05□□□□□ -0.96
GGA3-201ENST00000537686 HBG1P69891 147 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 HBG2P69892 147 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 OR1C1Q15619 314 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 ELFN2Q5R3F8 820 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 C1QL3Q5VWW1 255 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 DPPA2Q7Z7J5 298 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 ZAR1Q86SH2 424 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 ZNF808Q8N4W9 903 aaPredicted RBP9.05□□□□□ -0.96
GGA3-201ENST00000537686 PLPP5Q8NEB5 264 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 FRZBQ92765 325 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 ZNF764Q96H86 408 aaPredicted RBP9.05□□□□□ -0.96
GGA3-201ENST00000537686 ZNF2Q9BSG1 426 aaPredicted RBP9.05□□□□□ -0.96
GGA3-201ENST00000537686 PLEKHF2Q9H8W4 249 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 DECR2Q9NUI1 292 aa9.05□□□□□ -0.96
GGA3-201ENST00000537686 TMEM200CA6NKL6 621 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 HRKO00198 91 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 NXPH3O95157 252 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 SLC25A1P53007 311 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 CD226Q15762 336 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.04□□□□□ -0.96
GGA3-201ENST00000537686 SLC22A25Q6T423 547 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 BTLAQ7Z6A9 289 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 NOXO1Q8NFA2 376 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 OR51A4Q8NGJ6 313 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 OR10R2Q8NGX6 335 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 OR10J5Q8NHC4 309 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 SSX3Q99909 188 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 PROCRQ9UNN8 238 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 MEIKINA0A087WXM9 373 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 TRGV5A0A0B4J1U4 118 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 A0A1B0GTH9 108 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 FFAR1O14842 300 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 RER1O15258 196 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 TRAPPC2P0DI81 140 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 TRAPPC2BP0DI82 140 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 GNB3P16520 340 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 DDOSTP39656 456 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 MAGEB1P43366 347 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 RFX2P48378 723 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 EMP3P54852 163 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 ZNF141Q15928 474 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 WDR38Q5JTN6 314 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 LSRQ86X29 649 aaPredicted RBP9.04□□□□□ -0.96
GGA3-201ENST00000537686 OR4D11Q8NGI4 311 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 MSI2Q96DH6 328 aaKnown RBP9.04□□□□□ -0.96
GGA3-201ENST00000537686 C4orf45Q96LM5 186 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 VSTM2LQ96N03 204 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 UBL7Q96S82 380 aaPredicted RBP9.04□□□□□ -0.96
GGA3-201ENST00000537686 FAM173AQ9BQD7 235 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 CNTNAP3Q9BZ76 1288 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 EGLN1Q9GZT9 426 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 TRAV1-2A0A0B4J238 106 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 TRAV17A0A0B4J275 112 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 NPIPB8E9PQR5 432 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 ST8SIA3O43173 380 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 OR5H8P0DN80 308 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 PTHLHP12272 177 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 CTLA4P16410 223 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 HAAOP46952 286 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 FZD5Q13467 585 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 SSX1Q16384 188 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 FAM109AQ8N4B1 249 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 EXD3Q8N9H8 876 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 WDSUB1Q8N9V3 476 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 DEFB124Q8NES8 71 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 OR5M9Q8NGP3 310 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 OR6K3Q8NGY3 331 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 SMIM4Q8WVI0 70 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 ARPC5LQ9BPX5 153 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 ZFP64Q9NPA5 681 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 ST3GAL6Q9Y274 331 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 MED12Q93074 2177 aa9.04□□□□□ -0.96
GGA3-201ENST00000537686 MDC1Q14676 2089 aaKnown RBP9.03□□□□□ -0.96
GGA3-201ENST00000537686 LRRC30A6NM36 301 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 RGS11O94810 467 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 C1QBP02746 253 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 FCARP24071 287 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 ARL3P36405 182 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 ECI1P42126 302 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 RAD52P43351 418 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 S100A12P80511 92 aa9.03□□□□□ -0.96
GGA3-201ENST00000537686 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.961e-6■■■■□ 21.2
GGA3-201ENST00000537686 BAMBIQ13145 260 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms