RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 OR8D4Q8NGM9 314 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 OR9Q1Q8NGQ5 310 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 OR2T4Q8NH00 348 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 TECTBQ96PL2 329 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 BTBD10Q9BSF8 475 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 ADAT1Q9BUB4 502 aaKnown RBP7.01□□□□□ -1.29
USP28-203ENST00000537490 CHIAQ9BZP6 476 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 FAM107BQ9H098 131 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 MMADHCQ9H3L0 296 aaPredicted RBP7.01□□□□□ -1.29
USP28-203ENST00000537490 MARCH7Q9H992 704 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 SMURF1Q9HCE7 757 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 NOX4Q9NPH5 578 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 CENPMQ9NSP4 180 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 C1orf123Q9NWV4 160 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 IL20Q9NYY1 176 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 N6AMT1Q9Y5N5 214 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 MMP24Q9Y5R2 645 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 LYVE1Q9Y5Y7 322 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 CDH10Q9Y6N8 788 aa7.01□□□□□ -1.29
USP28-203ENST00000537490 IGHV3OR15-7A0A075B7D8 119 aa7□□□□□ -1.29
USP28-203ENST00000537490 TRAV38-1A0A0B4J264 116 aa7□□□□□ -1.29
USP28-203ENST00000537490 OOEPA6NGQ2 149 aa7□□□□□ -1.29
USP28-203ENST00000537490 TNFRSF11BO00300 401 aa7□□□□□ -1.29
USP28-203ENST00000537490 P2RY10O00398 339 aa7□□□□□ -1.29
USP28-203ENST00000537490 ZNF593O00488 134 aaPredicted RBP7□□□□□ -1.29
USP28-203ENST00000537490 TOX4O94842 621 aa7□□□□□ -1.29
USP28-203ENST00000537490 LHBP01229 141 aa7□□□□□ -1.29
USP28-203ENST00000537490 GYPAP02724 150 aa7□□□□□ -1.29
USP28-203ENST00000537490 GYPBP06028 91 aa7□□□□□ -1.29
USP28-203ENST00000537490 LIPFP07098 398 aa7□□□□□ -1.29
USP28-203ENST00000537490 MELTFP08582 738 aa7□□□□□ -1.29
USP28-203ENST00000537490 SPARCP09486 303 aa7□□□□□ -1.29
USP28-203ENST00000537490 CLUP10909 449 aa7□□□□□ -1.29
USP28-203ENST00000537490 ARF6P62330 175 aa7□□□□□ -1.29
USP28-203ENST00000537490 ELF3P78545 371 aaPredicted RBP7□□□□□ -1.29
USP28-203ENST00000537490 DEFA6Q01524 100 aa7□□□□□ -1.29
USP28-203ENST00000537490 PPP1R8Q12972 351 aaKnown RBP7□□□□□ -1.29
USP28-203ENST00000537490 CRMP1Q14194 572 aa7□□□□□ -1.29
USP28-203ENST00000537490 KCNJ8Q15842 424 aa7□□□□□ -1.29
USP28-203ENST00000537490 PCK2Q16822 640 aa7□□□□□ -1.29
USP28-203ENST00000537490 SAMD4BQ5PRF9 694 aaKnown RBP7□□□□□ -1.29
USP28-203ENST00000537490 CD276Q5ZPR3 534 aa7□□□□□ -1.29
USP28-203ENST00000537490 ZNF770Q6IQ21 691 aaPredicted RBP7□□□□□ -1.29
USP28-203ENST00000537490 C11orf53Q8IXP5 236 aa7□□□□□ -1.29
USP28-203ENST00000537490 FGFRL1Q8N441 504 aa7□□□□□ -1.29
USP28-203ENST00000537490 LNX2Q8N448 690 aa7□□□□□ -1.29
USP28-203ENST00000537490 GCSAMQ8N6F7 178 aa7□□□□□ -1.29
USP28-203ENST00000537490 SPERTQ8NA61 448 aa7□□□□□ -1.29
USP28-203ENST00000537490 OR52L1Q8NGH7 329 aa7□□□□□ -1.29
USP28-203ENST00000537490 OR4C15Q8NGM1 316 aa7□□□□□ -1.29
USP28-203ENST00000537490 OR4Q3Q8NH05 313 aa7□□□□□ -1.29
USP28-203ENST00000537490 SLAMF6Q96DU3 332 aa7□□□□□ -1.29
USP28-203ENST00000537490 WDFY2Q96P53 400 aa7□□□□□ -1.29
USP28-203ENST00000537490 KCNJ15Q99712 375 aa7□□□□□ -1.29
USP28-203ENST00000537490 COPS4Q9BT78 406 aa7□□□□□ -1.29
USP28-203ENST00000537490 TSSK6Q9BXA6 273 aa7□□□□□ -1.29
USP28-203ENST00000537490 SIRPDQ9H106 197 aa7□□□□□ -1.29
USP28-203ENST00000537490 MED4Q9NPJ6 270 aa7□□□□□ -1.29
USP28-203ENST00000537490 ARL8BQ9NVJ2 186 aa7□□□□□ -1.29
USP28-203ENST00000537490 C1RLQ9NZP8 487 aa7□□□□□ -1.29
USP28-203ENST00000537490 MRPL15Q9P015 296 aaKnown RBP7□□□□□ -1.29
USP28-203ENST00000537490 NOP16Q9Y3C1 178 aaKnown RBP7□□□□□ -1.29
USP28-203ENST00000537490 COMMD3-BMI1R4GMX3 469 aa7□□□□□ -1.29
USP28-203ENST00000537490 A0A1B0GUS0 222 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 A0A1B0GW55 424 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 hCG_1807616A0A1W2PRN6 198 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 A6NLC8 198 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DVL1O14640 695 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 NDUFA2O43678 99 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 KRT36O76013 467 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 KNG1P01042 644 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 CRYBA1P05813 215 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4L2P0CJ85 424 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4L3P0CJ86 424 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4L4P0CJ87 422 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4L5P0CJ88 424 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4L6P0CJ89 424 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4L7P0CJ90 424 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 FMO3P31513 532 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 ENTPD1P49961 510 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 RAG2P55895 527 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 KRTAP10-3P60369 221 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 FAM3AP98173 230 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 TAF13Q15543 124 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 TEX30Q5JUR7 227 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 RPL13AP3Q6NVV1 102 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DUX4L9Q6RFH8 374 aaPredicted RBP6.99□□□□□ -1.29
USP28-203ENST00000537490 CYP2R1Q6VVX0 501 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 RASSF6Q6ZTQ3 369 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 BTN2A1Q7KYR7 527 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 WDR86Q86TI4 376 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 FAM90A1Q86YD7 464 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 DEFB107AQ8IZN7 70 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 TMEM86BQ8N661 226 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 PNLDC1Q8NA58 520 aaKnown RBP6.99□□□□□ -1.29
USP28-203ENST00000537490 OR4F5Q8NH21 305 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 WFDC12Q8WWY7 111 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 LHX4Q969G2 390 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 SPSB4Q96A44 273 aa6.99□□□□□ -1.29
USP28-203ENST00000537490 SGK3Q96BR1 496 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms