RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 HOXA4Q00056 320 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 TAF13Q15543 124 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RFX4Q33E94 735 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CDONQ4KMG0 1287 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SLC36A1Q7Z2H8 476 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 HDXQ7Z353 690 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SLC15A3Q8IY34 581 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR6V1Q8N148 313 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SDR9C7Q8NEX9 313 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR52J3Q8NH60 311 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR2AE1Q8NHA4 323 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RP9Q8TA86 221 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 HOPXQ9BPY8 73 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 COPS4Q9BT78 406 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RASSF4Q9H2L5 321 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 OR52D1Q9H346 318 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CNTD2Q9H8S5 307 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 FGFR1OP2Q9NVK5 253 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 CYB5R1Q9UHQ9 305 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 VPREB3Q9UKI3 123 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SAMD4AQ9UPU9 718 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 N6AMT1Q9Y5N5 214 aa10.72□□□□□ -0.69
TNFRSF1A-207ENST00000535958 TRBV4-1A0A0J9YWV2 114 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ANKRD30BLA7E2S9 258 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 NCK1P16333 377 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 HIST1H1CP16403 213 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 IFNGR2P38484 337 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GSK3BP49841 420 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SMIM11AP58511 58 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 SPIBQ01892 262 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ZNF92Q03936 586 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 MICBQ29980 383 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 KRTAP27-1Q3LI81 207 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 Q6ZSV7 163 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 Q6ZTK2 550 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 NAA40Q86UY6 237 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GALNT4Q8N4A0 578 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ZSCAN4Q8NAM6 433 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 PROKR2Q8NFJ6 384 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 NPRL2Q8WTW4 380 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 FN3KQ9H479 309 aa10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 ARGLU1Q9NWB6 273 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 GMPR2Q9P2T1 348 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 RPUSD1Q9UJJ7 312 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-207ENST00000535958 IGHV3OR15-7A0A075B7D8 119 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 NME4O00746 187 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 ARPC3O15145 178 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 XRCC2O43543 280 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 NDUFB3O43676 98 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 PTBP3O95758 552 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 TGFBR2P37173 567 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 NUDT2P50583 147 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 FXYD6P3P58550 94 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 EGR3Q06889 387 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 RSPO1Q2MKA7 263 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 SNAI3Q3KNW1 292 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 GLYATL3Q5SZD4 288 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 DRAM2Q6UX65 266 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 ZNF826PQ6ZT77 177 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 ZBTB46Q86UZ6 589 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 FAM90A1Q86YD7 464 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 GCSAMQ8N6F7 178 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 OR52L1Q8NGH7 329 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 OR56B2PQ8NGI1 322 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 OR5R1Q8NH85 324 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 C16orf95Q9H693 158 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 SIRT7Q9NRC8 400 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 NDUFAF4Q9P032 175 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 ZNRD1Q9P1U0 126 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 KAAG1Q9UBP8 84 aa10.7□□□□□ -0.7
TNFRSF1A-207ENST00000535958 TET2Q6N021 2002 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 C5orf63A6NC05 138 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 NKX6-3A6NJ46 265 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 TBX1O43435 398 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 IDH3BO43837 385 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 DIRAS1O95057 198 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 GADD45GO95257 159 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 COX4I1P13073 169 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 MUC1P15941 1255 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 GNALP38405 381 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 NAA10P41227 235 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 POU4F2Q12837 409 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 SEC23BQ15437 767 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 LRRC10Q5BKY1 277 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 TEX36Q5VZQ5 186 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 DPY19L4Q7Z388 723 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 LRRC29Q8WV35 223 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 H1FXQ92522 213 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 MCUR1Q96AQ8 359 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 MAP6Q96JE9 813 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 CCL13Q99616 98 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 EFCAB1Q9HAE3 211 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 PNRC2Q9NPJ4 139 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 DNAJB11Q9UBS4 358 aa10.69□□□□□ -0.7
TNFRSF1A-207ENST00000535958 ZNF816-ZNF321PA0A0X1KG74 233 aa10.68□□□□□ -0.7
TNFRSF1A-207ENST00000535958 MEIOCA2RUB1 952 aa10.68□□□□□ -0.7
TNFRSF1A-207ENST00000535958 OR6C68A6NDL8 312 aa10.68□□□□□ -0.7
TNFRSF1A-207ENST00000535958 GPR37O15354 613 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms