RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SELEP16581 610 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 ZNF81P51508 661 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 EFNA4P52798 201 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 OR12D2P58182 307 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 GALEQ14376 348 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 TIGD6Q17RP2 521 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 GFOD2Q3B7J2 385 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 C6orf141Q5SZD1 244 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 LIPNQ5VXI9 398 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 Q6ZR03 302 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 BHLHE23Q8NDY6 225 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 BPIFB6Q8NFQ5 453 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 OR8G5Q8NG78 346 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 RORBQ92753 470 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 GGHQ92820 318 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 RNF166Q96A37 237 aaPredicted RBP10.28□□□□□ -0.76
CHD4-203ENST00000535717 REEP6Q96HR9 211 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 SIGLEC11Q96RL6 698 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 ZNF184Q99676 751 aaPredicted RBP10.28□□□□□ -0.76
CHD4-203ENST00000535717 ALG8Q9BVK2 526 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 JAM3Q9BX67 310 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 PBOV1Q9GZY1 135 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 BARX1Q9HBU1 254 aaPredicted RBP10.28□□□□□ -0.76
CHD4-203ENST00000535717 MSL2Q9HCI7 577 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 G6PC2Q9NQR9 355 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 INPP5EQ9NRR6 644 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 CYSLTR2Q9NS75 346 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 ACOXLQ9NUZ1 547 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 ERVK13-1Q9NX77 482 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 CGGBP1Q9UFW8 167 aaPredicted RBP10.28□□□□□ -0.76
CHD4-203ENST00000535717 NUFIP1Q9UHK0 495 aaKnown RBP10.28□□□□□ -0.76
CHD4-203ENST00000535717 PSORS1C1Q9UIG5 152 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 GNG8Q9UK08 70 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 RAB26Q9ULW5 256 aa10.28□□□□□ -0.76
CHD4-203ENST00000535717 IRGMA1A4Y4 181 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 EFCAB10A6NFE3 127 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 CD300LBA8K4G0 201 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 LOC110117498-PIK3R3F6TDL0 507 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 SPRY3O43610 288 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 SSX4O60224 188 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 IGHV1-46P01743 117 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 ERCC1P07992 297 aaPredicted RBP10.27□□□□□ -0.77
CHD4-203ENST00000535717 LIMS3P0CW19 117 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 LIMS4P0CW20 117 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 PIPP12273 146 aaPredicted RBP10.27□□□□□ -0.77
CHD4-203ENST00000535717 DCKP27707 260 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 LIPAP38571 399 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 PSMB10P40306 273 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 MAGEB1P43366 347 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 GSK3AP49840 483 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 ETV1P50549 477 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 ACTA2P62736 377 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 ACTG2P63267 376 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 FAM3AP98173 230 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 MVKQ03426 396 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 ST3GAL4Q11206 333 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 Q5PR19 223 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 BCL2L15Q5TBC7 163 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 FAM220AQ7Z4H9 259 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 KCTD20Q7Z5Y7 419 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 SPRYD4Q8WW59 207 aaPredicted RBP10.27□□□□□ -0.77
CHD4-203ENST00000535717 NEU4Q8WWR8 484 aaPredicted RBP10.27□□□□□ -0.77
CHD4-203ENST00000535717 LYZL4Q96KX0 146 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 RGCCQ9H4X1 137 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 OPA3Q9H6K4 179 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 MOB1AQ9H8S9 216 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 ISG20L2Q9H9L3 353 aaKnown RBP10.27□□□□□ -0.77
CHD4-203ENST00000535717 OR52A1Q9UKL2 312 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 BLOC1S6Q9UL45 172 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 GTF2A1LQ9UNN4 478 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 DIMT1Q9UNQ2 313 aaKnown RBP10.27□□□□□ -0.77
CHD4-203ENST00000535717 PCDHGB5Q9Y5G0 923 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 SNX5Q9Y5X3 404 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 FLNAP21333 2647 aaKnown RBP10.27□□□□□ -0.77
CHD4-203ENST00000535717 HIVEP1P15822 2718 aa10.27□□□□□ -0.77
CHD4-203ENST00000535717 A0A0U1RQV5 110 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 hCG_38984A0A1B0GV85 526 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 A0A1B0GWJ7 208 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 GGT3PA6NGU5 568 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 J3QLW9 94 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 SLC1A7O00341 560 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 NCR1O76036 304 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 IGLV3-1P01715 115 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 TTRP02766 147 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 HPXP02790 462 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 ADH4P08319 380 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 TACSTD2P09758 323 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 ZNF19P17023 458 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 CFL1P23528 166 aaKnown RBP10.26□□□□□ -0.77
CHD4-203ENST00000535717 RANBP1P43487 201 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 CCL8P80075 99 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 TNK1Q13470 666 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 TSTQ16762 297 aaKnown RBP10.26□□□□□ -0.77
CHD4-203ENST00000535717 CNPY1Q3B7I2 92 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 PCGF3Q3KNV8 242 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 ZMAT1Q5H9K5 638 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 SHEQ5VZ18 495 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 PRSS57Q6UWY2 283 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 CATSPERDQ86XM0 798 aa10.26□□□□□ -0.77
CHD4-203ENST00000535717 ELMOD2Q8IZ81 293 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms