RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 KLK8O60259 260 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 OR4Q3Q8NH05 313 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 FBXW5Q969U6 566 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 IL21Q9HBE4 155 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 B9D1Q9UPM9 204 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 CDK5R1Q15078 307 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 GSG1Q2KHT4 349 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 WIPI1Q5MNZ9 446 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 OTPQ5XKR4 325 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 FBXL4Q9UKA2 621 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 TSPAN12O95859 305 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 MPLP40238 635 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 DHRS13Q6UX07 377 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 STAC2Q6ZMT1 411 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 ZFP62Q8NB50 900 aaPredicted RBP16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 HMX2A2RU54 273 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 MGMTP16455 207 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 COX5AP20674 150 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 HRH1P35367 487 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 GPM6AP51674 278 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 FAM122CQ6P4D5 195 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 KIRREL2Q6UWL6 708 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 MYEOVQ96EZ4 313 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 PELI1Q96FA3 418 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 RNF167Q9H6Y7 350 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 GOLT1BQ9Y3E0 138 aa16.4■□□□□ 0.22
SFSWAP-203ENST00000535236 E5RGE8 158 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 CYC1P08574 325 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF239Q16600 458 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 LHX4Q969G2 390 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 ING1Q9UK53 422 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 NSG2Q9Y328 171 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 PDGFBP01127 241 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 ATF1P18846 271 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 CDAP32320 146 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 AQP6Q13520 282 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 CADM4Q8NFZ8 388 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 MYO18AQ92614 2054 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 IFITM5A6NNB3 132 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 ADAM10O14672 748 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 SPRY1O43609 319 aaPredicted RBP16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 ETHE1O95571 254 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 PI3P19957 117 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 BMI1P35226 326 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 OR2Z1Q8NG97 314 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 HES4Q9HCC6 221 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 A0A087WUJ7 227 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 GPX5O75715 221 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 RPL12P30050 165 aaKnown RBP16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 FCER1GP30273 86 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 HYAL1Q12794 435 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 DEFB124Q8NES8 71 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 SLC39A7Q92504 469 aa16.39■□□□□ 0.21
SFSWAP-203ENST00000535236 PSMB6P28072 239 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 SNRPNP63162 240 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF816Q0VGE8 651 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 RAB35Q15286 201 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 VMA21Q3ZAQ7 101 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 CNRIP1Q96F85 164 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 OR2W5A6NFC9 320 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 SDHBP21912 280 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 SOX18P35713 384 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 RAB1AP62820 205 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 AGERQ15109 404 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 ERGIC1Q969X5 290 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 AKR1E2Q96JD6 320 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 PLEKHA2Q9HB19 425 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 MYOZ1Q9NP98 299 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 THBS4P35443 961 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 PIGPP57054 158 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 PRDX4Q13162 271 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 LHX8Q68G74 356 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 ACOT7LQ6ZUV0 252 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 SLC36A1Q7Z2H8 476 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 C14orf79Q96F83 325 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 A0A0A6YYD5 115 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 GOSR1O95249 250 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 NME1P15531 152 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 DDOSTP39656 456 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 GUSBP11Q6P575 273 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 VASH2Q86V25 355 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 OR1F12Q8NHA8 337 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 ADAT1Q9BUB4 502 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 NARFLQ9H6Q4 476 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 P4HTMQ9NXG6 502 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 CLCF1Q9UBD9 225 aa16.38■□□□□ 0.21
SFSWAP-203ENST00000535236 DBX1A6NMT0 343 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 FAHP16930 419 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 AKR1C3P42330 323 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 KIAA0141Q14154 515 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 STUMQ69YW2 141 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ARHGEF39Q8N4T4 335 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 TMEM30CPA0ZSE6 113 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 ZNF727A8MUV8 499 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 SMIM17P0DL12 118 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 MEOX1P50221 254 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 BAMBIQ13145 260 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 H3F3CQ6NXT2 135 aa16.37■□□□□ 0.21
SFSWAP-203ENST00000535236 CDH26Q8IXH8 852 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms