RNA–Protein interactions for RNA: ENST00000534296.5

CD44-238, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-238ENST00000534296 HADHQ16836 314 aaKnown RBP1.6□□□□□ -2.15
CD44-238ENST00000534296 GUSBP11Q6P575 273 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 CLEC2AQ6UVW9 174 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 SLC16A13Q7RTY0 426 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 APRG1Q8IVJ8 170 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 SLC30A8Q8IWU4 369 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 PDCL2Q8N4E4 241 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 NPWQ8N729 165 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 ZNF615Q8N8J6 731 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 TMEM104Q8NE00 496 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 ITFG1Q8TB96 612 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 RXFP4Q8TDU9 374 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 GPX8Q8TED1 209 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 PIH1D2Q8WWB5 315 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 SLC25A46Q96AG3 418 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 SCGB3A2Q96PL1 93 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 ZNF317Q96PQ6 595 aaPredicted RBP1.6□□□□□ -2.15
CD44-238ENST00000534296 TEAD3Q99594 435 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 FGF23Q9GZV9 251 aaPredicted RBP1.6□□□□□ -2.15
CD44-238ENST00000534296 OR52D1Q9H346 318 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 ACP6Q9NPH0 428 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 RRAGDQ9NQL2 400 aaPredicted RBP1.6□□□□□ -2.15
CD44-238ENST00000534296 PSME2Q9UL46 239 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 RCL1Q9Y2P8 373 aaKnown RBP1.6□□□□□ -2.15
CD44-238ENST00000534296 YARS2Q9Y2Z4 477 aaKnown RBP1.6□□□□□ -2.15
CD44-238ENST00000534296 CAMTA1Q9Y6Y1 1673 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 MYO10Q9HD67 2058 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 IGSF9BQ9UPX0 1349 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 SLIT3O75094 1523 aa1.6□□□□□ -2.15
CD44-238ENST00000534296 C2orf16Q68DN1 1984 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 ADAMTS13Q76LX8 1427 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 IGHV3-49A0A0A0MS15 119 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 TRAV25A0A0B4J276 109 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 IGHV3OR16-9A0A0B4J2B5 98 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 A0A0J9YXV3 536 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 A0A0U1RQV1 116 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 OR5H1A6NKK0 313 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 K7EMT4 169 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 MANBAO00462 879 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 SLC19A2O60779 497 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 UPK1BO75841 260 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 AQP8O94778 261 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 MPZL1O95297 269 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 TDP2O95551 362 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 CCNE2O96020 404 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 OXTP01178 125 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 MT-ND4P03905 459 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 GZMAP12544 262 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 PMCHP20382 165 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 USF1P22415 310 aaPredicted RBP1.59□□□□□ -2.15
CD44-238ENST00000534296 CD82P27701 267 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 PSMB5P28074 263 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 ARL2P36404 184 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 PPICP45877 212 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 RAB11AP62491 216 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 PRR3P79522 188 aaKnown RBP1.59□□□□□ -2.15
CD44-238ENST00000534296 PNOCQ13519 176 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 RAB11BQ15907 218 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 OR2T5Q6IEZ7 315 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 OPN5Q6U736 354 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 CD300LGQ6UXG3 332 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 WDR82Q6UXN9 313 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 CALHM3Q86XJ0 350 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 LINC00469Q8N7U9 141 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 C15orf56Q8N910 161 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 ZNF709Q8N972 641 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 PROKR2Q8NFJ6 384 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 OR2T29Q8NH02 315 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 OR52E5Q8NH55 327 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 OR51F2Q8NH61 342 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 GLYATL2Q8WU03 294 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 DCAKDQ8WVC6 231 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 RPEQ96AT9 228 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 RMI2Q96E14 147 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 SGTBQ96EQ0 304 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 DYNLL2Q96FJ2 89 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 CERS2Q96G23 380 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 NAP1L5Q96NT1 182 aaPredicted RBP1.59□□□□□ -2.15
CD44-238ENST00000534296 CSPG4P5Q96PW8 444 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 RBBP8Q99708 897 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 ZNF2Q9BSG1 426 aaPredicted RBP1.59□□□□□ -2.15
CD44-238ENST00000534296 TMEM243Q9BU79 118 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 EMC6Q9BV81 110 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 ZNF717Q9BY31 904 aaPredicted RBP1.59□□□□□ -2.15
CD44-238ENST00000534296 IL22Q9GZX6 179 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 LYRM4Q9HD34 91 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 C6orf50Q9HD87 102 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 C21orf62Q9NYP8 219 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 GGA2Q9UJY4 613 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 CBY1Q9Y3M2 126 aa1.59□□□□□ -2.15
CD44-238ENST00000534296 MROH7Q68CQ1 1323 aa1.59□□□□□ -2.16
CD44-238ENST00000534296 WDR19Q8NEZ3 1342 aa1.59□□□□□ -2.16
CD44-238ENST00000534296 COL27A1Q8IZC6 1860 aaPredicted RBP1.58□□□□□ -2.16
CD44-238ENST00000534296 IGHV7-4-1A0A0J9YVY3 117 aa1.58□□□□□ -2.16
CD44-238ENST00000534296 GOLGA6L7A0A1B0GV03 622 aa1.58□□□□□ -2.16
CD44-238ENST00000534296 HACD1B0YJ81 288 aa1.58□□□□□ -2.16
CD44-238ENST00000534296 KRBOX1C9JBD0 128 aa1.58□□□□□ -2.16
CD44-238ENST00000534296 H0YJW9 148 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms