RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 GSK3AP49840 483 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 PRSS12P56730 875 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 FAM3AP98173 230 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 TLE4Q04727 773 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 SLC3A1Q07837 685 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 MLLT11Q13015 90 aaPredicted RBP10.22□□□□□ -0.77
COMMD9-208ENST00000533643 PSG7Q13046 419 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 TPBGQ13641 420 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 NEDD8Q15843 81 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 ARMCX4Q5H9R4 360 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 MBNL2Q5VZF2 373 aaKnown RBP10.22□□□□□ -0.77
COMMD9-208ENST00000533643 PGAP1Q75T13 922 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF676Q8N7Q3 588 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 OR5AK2Q8NH90 309 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 SYNPRQ8TBG9 265 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 FCGR1BQ92637 280 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 GHSRQ92847 366 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 MUL1Q969V5 352 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 MRPL24Q96A35 216 aaKnown RBP10.22□□□□□ -0.77
COMMD9-208ENST00000533643 SMIM19Q96E16 107 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 C14orf79Q96F83 325 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 PDCD1LG2Q9BQ51 273 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 MRPL37Q9BZE1 423 aaKnown RBP10.22□□□□□ -0.77
COMMD9-208ENST00000533643 RGCCQ9H4X1 137 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF391Q9UJN7 358 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 CELSR2Q9HCU4 2923 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 ROS1P08922 2347 aa10.22□□□□□ -0.77
COMMD9-208ENST00000533643 LRBAP50851 2863 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 hCG_38984A0A1B0GV85 526 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 LOC107986453A0A1B0GWG9 222 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 VSTM5A8MXK1 200 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 PLPP2O43688 288 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 IGHV3-13P01766 116 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 ISG15P05161 165 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 CD1AP06126 327 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 UBCP0CG48 685 aaKnown RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 JUNBP17275 347 aaPredicted RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 ACHEP22303 614 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 CCL1P22362 96 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 CFL1P23528 166 aaKnown RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 PSMB9P28065 219 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 GCH1P30793 250 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 APOBEC3AP31941 199 aaPredicted RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 SERPINF1P36955 418 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 TNK1Q13470 666 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 GPR50Q13585 617 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 ALKBH6Q3KRA9 238 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 TMEM244Q5VVB8 128 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 LIPKQ5VXJ0 399 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF787Q6DD87 383 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 OR2T2Q6IF00 324 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 Q6ZSR3 168 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 MRPL21Q7Z2W9 205 aaKnown RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 PLPP7Q8NBV4 271 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 OR10AC1Q8NH08 325 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 RGP1Q92546 391 aaPredicted RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 MARVELD3Q96A59 401 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 FAM71F1Q96KD3 344 aaPredicted RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 PGLYRP3Q96LB9 341 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 SYT3Q9BQG1 590 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 MRPS26Q9BYN8 205 aaKnown RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 CLEC4MQ9H2X3 399 aaPredicted RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 OPA3Q9H6K4 179 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 PLEKHF2Q9H8W4 249 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 MYEF2Q9P2K5 600 aaKnown RBP10.21□□□□□ -0.77
COMMD9-208ENST00000533643 DUSP13Q9UII6 198 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 ZNF281Q9Y2X9 895 aa10.21□□□□□ -0.77
COMMD9-208ENST00000533643 PLCE1Q9P212 2302 aa10.21□□□□□ -0.78
COMMD9-208ENST00000533643 IGLV3-9A0A075B6K5 115 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 A0A1B0GVI7 797 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 LOC390937A0A1W2PQ73 354 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 CD300LBA8K4G0 201 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 H3BSH0 61 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 SYT7O43581 403 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 LMX1BO60663 402 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 TACC2O95359 2948 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 CPEP16870 476 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 KITLGP21583 273 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 ACKR3P25106 362 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 SSTR2P30874 369 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 EVX1P49640 407 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 GP2P55259 537 aaKnown RBP10.2□□□□□ -0.78
COMMD9-208ENST00000533643 KLF3P57682 345 aaPredicted RBP10.2□□□□□ -0.78
COMMD9-208ENST00000533643 RPS11P62280 158 aaKnown RBP eCLIP10.2□□□□□ -0.78
COMMD9-208ENST00000533643 OR8B8Q15620 311 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 TSTQ16762 297 aaKnown RBP10.2□□□□□ -0.78
COMMD9-208ENST00000533643 MST1LQ2TV78 715 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 SYT6Q5T7P8 510 aaPredicted RBP10.2□□□□□ -0.78
COMMD9-208ENST00000533643 DOK3Q7L591 496 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 COMMD2Q86X83 199 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 OR56B2PQ8NGI1 322 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 OR14K1Q8NGZ2 314 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 UFD1Q92890 307 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 FBXW5Q969U6 566 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 COMMD4Q9H0A8 199 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 PLK3Q9H4B4 646 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 UBTD1Q9HAC8 227 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 VCX3AQ9NNX9 186 aa10.2□□□□□ -0.78
COMMD9-208ENST00000533643 PURGQ9UJV8 347 aaKnown RBP10.2□□□□□ -0.78
COMMD9-208ENST00000533643 HECTD1Q9ULT8 2610 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms