RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 AKR1C1Q04828 323 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF573Q86YE8 665 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 KCNRGQ8N5I3 272 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 FOXB1Q99853 325 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 AHCTF1Q8WYP5 2266 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 BHLHE40O14503 412 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 RGS11O94810 467 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 FCGR2CP31995 323 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 BRICD5Q6PL45 260 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 P4HTMQ9NXG6 502 aa15.77■□□□□ 0.11
PHRF1-205ENST00000533464 C17orf112F2Z3M2 114 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 GMDSO60547 372 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 TGM6O95932 706 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 IL2RAP01589 272 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 DUSP1P28562 367 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 RNF32Q9H0A6 362 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 GHRLQ9UBU3 117 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 SIRPB1O00241 398 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 ANGPTL7O43827 346 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 GLAP06280 429 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 GZMMP51124 257 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 HTD2P86397 168 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 RBMS3Q6XE24 437 aaKnown RBP15.76■□□□□ 0.11
PHRF1-205ENST00000533464 CARFQ8N187 725 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 OR4S1Q8NGB4 309 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 VSTM2LQ96N03 204 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 PLSCR3Q9NRY6 295 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 DOCK3Q8IZD9 2030 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 SPAG17Q6Q759 2223 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 RER1O15258 196 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 ALX3O95076 343 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 OR8G2PQ6IF36 304 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 PWWP2BQ6NUJ5 590 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 OR1S2Q8NGQ3 325 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 LRP5LA4QPB2 252 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 GREM1O60565 184 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 SELEP16581 610 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 TRA2AQ13595 282 aaKnown RBP eCLIP15.76■□□□□ 0.115e-8■□□□□ 10.4
PHRF1-205ENST00000533464 TMED6Q8WW62 240 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 HIPK2Q9H2X6 1198 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 FLRT3Q9NZU0 649 aa15.76■□□□□ 0.11
PHRF1-205ENST00000533464 A0A1W2PQF6 199 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 C1QCP02747 245 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 LSM11P83369 360 aaKnown RBP eCLIP15.75■□□□□ 0.113e-6■□□□□ 9.5
PHRF1-205ENST00000533464 CD226Q15762 336 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 YIPF5Q969M3 257 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 TAF1LQ8IZX4 1826 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 CCDC187A0A096LP49 1063 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 ANKRD34BA5PLL1 514 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 PYCARD-AS1I3L0S3 204 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 CYR61O00622 381 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 CTLA4P16410 223 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF468Q5VIY5 522 aaPredicted RBP15.75■□□□□ 0.11
PHRF1-205ENST00000533464 LSRQ86X29 649 aaPredicted RBP15.75■□□□□ 0.11
PHRF1-205ENST00000533464 PP6455Q8WZ26 134 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 TEX51A0A1B0GUA7 166 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 SLC22A20A6NK97 555 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 RRP8O43159 456 aaKnown RBP15.75■□□□□ 0.11
PHRF1-205ENST00000533464 ZDHHC23Q8IYP9 409 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 ARHGEF39Q8N4T4 335 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 PLA2G3Q9NZ20 509 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 SLC23A1Q9UHI7 598 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 PMS2P1A4D2B8 440 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 HRKO00198 91 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 DFFBO76075 338 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 HPNP05981 417 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 SNTB1Q13884 538 aaKnown RBP15.75■□□□□ 0.11
PHRF1-205ENST00000533464 DEFB109BQ30KR1 87 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 RHBDD2Q6NTF9 364 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 ZAR1Q86SH2 424 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 PCOLCE2Q9UKZ9 415 aa15.75■□□□□ 0.11
PHRF1-205ENST00000533464 LRRC30A6NM36 301 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 SH2D1BO14796 132 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 TNFSF14O43557 240 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 SSBP1Q04837 148 aaKnown RBP15.74■□□□□ 0.11
PHRF1-205ENST00000533464 TINAGL1Q9GZM7 467 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-205ENST00000533464 XIRP1Q702N8 1843 aaKnown RBP15.74■□□□□ 0.11
PHRF1-205ENST00000533464 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 MN1Q10571 1320 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-205ENST00000533464 RAB27BO00194 218 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 SPRY1O43609 319 aaPredicted RBP15.74■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF680Q8NEM1 530 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 OR2G3Q8NGZ4 309 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 SUCNR1Q9BXA5 334 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 MEIKINA0A087WXM9 373 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 ZNF816-ZNF321PA0A0X1KG74 233 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 EPPINO95925 133 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 IL9P15248 144 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 MPLP40238 635 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 AGFG1P52594 562 aaKnown RBP15.74■□□□□ 0.11
PHRF1-205ENST00000533464 DHRS13Q6UX07 377 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 ST7LQ8TDW4 575 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 APC2O95996 2303 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 CRYAAP02489 173 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 TESK1Q15569 626 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 C1QL3Q5VWW1 255 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 OR1F12Q8NHA8 337 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 SFT2D1Q8WV19 159 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 MFRPQ9BY79 579 aa15.74■□□□□ 0.11
PHRF1-205ENST00000533464 PIGMQ9H3S5 423 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms