RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ZNF12P17014 697 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 CD53P19397 219 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 CCL1P22362 96 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 MFGE8Q08431 387 aaPredicted RBP10.75□□□□□ -0.69
COPB1-208ENST00000532088 MLLT11Q13015 90 aaPredicted RBP10.75□□□□□ -0.69
COPB1-208ENST00000532088 CDK5R1Q15078 307 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 SNAI3Q3KNW1 292 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 ZNF718Q3SXZ3 478 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 BCL2L15Q5TBC7 163 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 TMEM244Q5VVB8 128 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 RGS7BPQ6MZT1 257 aaPredicted RBP10.75□□□□□ -0.69
COPB1-208ENST00000532088 FAM57BQ71RH2 274 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 NAA40Q86UY6 237 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 KBTBD8Q8NFY9 601 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 OR8B12Q8NGG6 310 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 TMEM171Q8WVE6 324 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 GATAD2BQ8WXI9 593 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 SMIM19Q96E16 107 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 MARS2Q96GW9 593 aaKnown RBP10.75□□□□□ -0.69
COPB1-208ENST00000532088 VCX3AQ9NNX9 186 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 ST6GALNAC2Q9UJ37 374 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 POU2F3Q9UKI9 436 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 STARD10Q9Y365 291 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 CMAHPQ9Y471 501 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 ATP23Q9Y6H3 246 aa10.75□□□□□ -0.69
COPB1-208ENST00000532088 LRRK2Q5S007 2527 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 IGLV3-9A0A075B6K5 115 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 OR4C45A6NMZ5 311 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 DHRS7CA6NNS2 312 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 PLPP2O43688 288 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 GPRIN2O60269 458 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 ATE1O95260 518 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 LCKP06239 509 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 SLC2A1P11166 492 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 SSTR2P30874 369 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 APOBEC3AP31941 199 aaPredicted RBP10.74□□□□□ -0.69
COPB1-208ENST00000532088 DDOSTP39656 456 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 CDH15P55291 814 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 MED22Q15528 200 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 EFNB3Q15768 340 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 MOGQ16653 247 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 TIGD6Q17RP2 521 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 WDR38Q5JTN6 314 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 DMKNQ6E0U4 476 aaPredicted RBP10.74□□□□□ -0.69
COPB1-208ENST00000532088 KRT74Q7RTS7 529 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 KLBQ86Z14 1044 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 PRSS35Q8N3Z0 413 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 LILRB1Q8NHL6 650 aaPredicted RBP10.74□□□□□ -0.69
COPB1-208ENST00000532088 SLC25A40Q8TBP6 338 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 FBXW5Q969U6 566 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 MRPL24Q96A35 216 aaKnown RBP10.74□□□□□ -0.69
COPB1-208ENST00000532088 SGK3Q96BR1 496 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 HAVCR1Q96D42 359 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 OR5M11Q96RB7 305 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 DHRS9Q9BPW9 319 aa10.74□□□□□ -0.69
COPB1-208ENST00000532088 CISD1Q9NZ45 108 aaKnown RBP10.74□□□□□ -0.69
COPB1-208ENST00000532088 CGGBP1Q9UFW8 167 aaPredicted RBP10.74□□□□□ -0.69
COPB1-208ENST00000532088 TRBV2A0A0J9YWF9 115 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 hCG_38984A0A1B0GV85 526 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 E7EQL1 145 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 E9PI62 339 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 HS3ST1O14792 307 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 TBX1O43435 398 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 MTRF1O75570 445 aaKnown RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 LALBAP00709 142 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 IGHV3-13P01766 116 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 JUNBP17275 347 aaPredicted RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 KITLGP21583 273 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 ACHEP22303 614 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 GCH1P30793 250 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 THBS4P35443 961 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 PSMB10P40306 273 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 KIR3DL2P43630 455 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 MAP2K4P45985 399 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 SELENOVP59797 346 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 NANOS3P60323 173 aaKnown RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 TPBGQ13641 420 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 GK2Q14410 553 aaPredicted RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 OR8B8Q15620 311 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 GLYATL3Q5SZD4 288 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 SYT6Q5T7P8 510 aaPredicted RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 ZBTB37Q5TC79 503 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 DOK3Q7L591 496 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 ZNF611Q8N823 705 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 SYNPRQ8TBG9 265 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 KLF14Q8TD94 323 aaPredicted RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 THRSPQ92748 146 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 C10orf35Q96D05 121 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 WDR89Q96FK6 387 aaPredicted RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 REEP6Q96HR9 211 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 MGLLQ99685 303 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 RSRP1Q9BUV0 290 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 MRPS26Q9BYN8 205 aaKnown RBP10.73□□□□□ -0.69
COPB1-208ENST00000532088 OR2J1Q9GZK6 312 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 COMMD4Q9H0A8 199 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 FAIMQ9NVQ4 179 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 ZNF319Q9P2F9 582 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 SLC22A13Q9Y226 551 aa10.73□□□□□ -0.69
COPB1-208ENST00000532088 HEATR1Q9H583 2144 aaKnown RBP10.72□□□□□ -0.69
COPB1-208ENST00000532088 A0A1B0GVI7 797 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms