RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 IRF2P14316 349 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 IGLL1P15814 213 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 CA6P23280 308 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 RGS6P49758 472 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 EFNB2P52799 333 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 FXYD6P3P58550 94 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 BPIFB3P59826 476 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 RPL15P61313 204 aaKnown RBP7.34□□□□□ -1.23
USF1-210ENST00000531842 KRR1Q13601 381 aaKnown RBP7.34□□□□□ -1.23
USF1-210ENST00000531842 SEC23BQ15437 767 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 ZNF181Q2M3W8 571 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 FGD3Q5JSP0 725 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 GLYATQ6IB77 296 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 TMPRSS11FQ6ZWK6 438 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 REC114Q7Z4M0 266 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 Q8N7P7 452 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 FAM162AQ96A26 154 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 FAM46AQ96IP4 442 aaKnown RBP7.34□□□□□ -1.23
USF1-210ENST00000531842 TSSK2Q96PF2 358 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 KCTD14Q9BQ13 255 aaPredicted RBP7.34□□□□□ -1.23
USF1-210ENST00000531842 SYT4Q9H2B2 425 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 DPAGT1Q9H3H5 408 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 PPP1R3EQ9H7J1 279 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 NMNAT1Q9HAN9 279 aaPredicted RBP7.34□□□□□ -1.23
USF1-210ENST00000531842 SPAG4Q9NPE6 437 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 TMEM100Q9NV29 134 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 NECAP2Q9NVZ3 263 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 KIF17Q9P2E2 1029 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 ERVK-18Q9QC07 812 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 TMEM5Q9Y2B1 443 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 IER3IP1Q9Y5U9 82 aa7.34□□□□□ -1.23
USF1-210ENST00000531842 WI2-2373I1.2A0A1W2PRP0 233 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 H3BUX3 64 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 LGALS8O00214 317 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 DCTN6O00399 190 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 SOCS2O14508 198 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 NPFFO15130 113 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 CHST1O43916 411 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 GMNNO75496 209 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 NDUFB2O95178 105 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 H1F0P07305 194 aaKnown RBP7.33□□□□□ -1.24
USF1-210ENST00000531842 GRPP07492 148 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 SDHAP31040 664 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 SAA4P35542 130 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 RPS6KA3P51812 740 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 GMFBP60983 142 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 LSM6P62312 80 aaKnown RBP7.33□□□□□ -1.24
USF1-210ENST00000531842 GK2Q14410 553 aaPredicted RBP7.33□□□□□ -1.24
USF1-210ENST00000531842 KRT72Q14CN4 511 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 CD276Q5ZPR3 534 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 GPR139Q6DWJ6 353 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 DNM1P34Q6PK57 102 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 C1orf87Q8N0U7 546 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 PGAM4Q8N0Y7 254 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 LNX2Q8N448 690 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 FAM216BQ8N7L0 139 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 PNLDC1Q8NA58 520 aaKnown RBP7.33□□□□□ -1.24
USF1-210ENST00000531842 GJC3Q8NFK1 279 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 OR11L1Q8NGX0 322 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 SLC7A13Q8TCU3 470 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 CFHR4Q92496 578 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 APOBEC3DQ96AK3 386 aaPredicted RBP7.33□□□□□ -1.24
USF1-210ENST00000531842 SLCO4A1Q96BD0 722 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 RSRC1Q96IZ7 334 aaKnown RBP7.33□□□□□ -1.24
USF1-210ENST00000531842 DHRS1Q96LJ7 313 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 CDRT15Q96T59 188 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 CCL13Q99616 98 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 HCAR1Q9BXC0 346 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 NUAK2Q9H093 628 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 GORASP2Q9H8Y8 452 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 KRCC1Q9NPI7 259 aaPredicted RBP7.33□□□□□ -1.24
USF1-210ENST00000531842 C1orf123Q9NWV4 160 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 RNF7Q9UBF6 113 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 FBLN5Q9UBX5 448 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 TAGLN3Q9UI15 199 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 RPS6KA6Q9UK32 745 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 AURKCQ9UQB9 309 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 LHFPL6Q9Y693 200 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 ENPP4Q9Y6X5 453 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 RYR2Q92736 4967 aa7.33□□□□□ -1.24
USF1-210ENST00000531842 TRBV4-1A0A0J9YWV2 114 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 A0A1B0GWJ7 208 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 A0A1W2PRX2 142 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 MEIOCA2RUB1 952 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 OOEPA6NGQ2 149 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 UNC119BA6NIH7 251 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 F5H5K5 113 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 J3QW42 95 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 ARPC2O15144 300 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 PTP4A3O75365 173 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 FBP1P09467 338 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 AMY2BP19961 511 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 ATP6V1B2P21281 511 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 CPT2P23786 658 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 CRABP1P29762 137 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 TGFBR2P37173 567 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 CD200P41217 278 aa7.32□□□□□ -1.24
USF1-210ENST00000531842 GATA4P43694 442 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms