RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 OR11H2Q8NH07 326 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 GPR151Q8TDV0 419 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SKA2Q8WVK7 121 aaPredicted RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 DNAJC9Q8WXX5 260 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 C11orf40Q8WZ69 217 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RORBQ92753 470 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RPL3LQ92901 407 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 C18orf25Q96B23 403 aaPredicted RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TLCD1Q96CP7 247 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RAB39BQ96DA2 213 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 NDUFAF3Q9BU61 184 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ELOVL4Q9GZR5 314 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 MFSD1Q9H3U5 465 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TPT1P8Q9HAU6 139 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 PLEKHA1Q9HB21 404 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 MAT2BQ9NZL9 334 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 MRTO4Q9UKD2 239 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TFR2Q9UP52 801 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 SLC7A11Q9UPY5 501 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RNF6Q9Y252 685 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 FARSAQ9Y285 508 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 TMED7Q9Y3B3 224 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 COLEC10Q9Y6Z7 277 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 FLT4P35916 1363 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 DHX57Q6P158 1386 aaKnown RBP2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ATP10AO60312 1499 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ARAP1Q96P48 1450 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ABCB11O95342 1321 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 ZMYM6O95789 1325 aa2.68□□□□□ -1.98
PTPRK-220ENST00000531466 RNF222A6NCQ9 220 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TRABD2BA6NFA1 517 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ZNF732B4DXR9 585 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 FTCDNL1E5RQL4 147 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 G3V2T6 193 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 PANO1I0J062 215 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ARPC1BO15143 372 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 UBDO15205 165 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SIVA1O15304 175 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 DLEU1O43261 78 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 AIREO43918 545 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SHOX2O60902 331 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 FCN3O75636 299 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SC5DO75845 299 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 GJB5O95377 273 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RAB36O95755 333 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM50AO95807 157 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TSPAN13O95857 204 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 HLA-HP01893 362 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 KLK3P07288 261 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RHOCP08134 193 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 OR10J4P0C629 311 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TSPAN19P0C672 248 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 OR8U9P0C7N5 309 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 C8orf88P0DMB2 117 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 IFI30P13284 250 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 B4GALT1P15291 398 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SPI1P17947 270 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 FUT3P21217 361 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CALML3P27482 149 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 S100GP29377 79 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SLC6A1P30531 599 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 MDH2P40926 338 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RFC3P40938 356 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TNFSF9P41273 254 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RPS9P46781 194 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 PRLHRP49683 370 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RAB7AP51149 207 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 DAP3P51398 398 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CAV2P51636 162 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CCR6P51684 374 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 AKR1D1P51857 326 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 HMGCS2P54868 508 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ERVK-8P63133 956 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 MRPS11P82912 194 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SEMG2Q02383 582 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 MFGE8Q08431 387 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CNTN1Q12860 1018 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 MLLT11Q13015 90 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 EXOSC2Q13868 293 aaKnown RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CEACAM7Q14002 265 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 MPPED2Q15777 294 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CYP51A1Q16850 503 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ECSCRQ19T08 205 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CEACAM21Q3KPI0 293 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 RESP18Q5W5W9 173 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SLC22A10Q63ZE4 541 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 TMEM42Q69YG0 159 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ADNP2Q6IQ32 1131 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CAPN13Q6MZZ7 669 aaPredicted RBP2.67□□□□□ -1.98
PTPRK-220ENST00000531466 Q6P435 159 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CD200R1LQ6Q8B3 271 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 GOLGA7Q7Z5G4 137 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 ACOT1Q86TX2 421 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 SKA3Q8IX90 412 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CLDN19Q8N6F1 224 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 OR5AU1Q8NGC0 362 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 OR1L6Q8NGR2 347 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 OR10X1Q8NGY0 326 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 OR6K3Q8NGY3 331 aa2.67□□□□□ -1.98
PTPRK-220ENST00000531466 CD99L2Q8TCZ2 262 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms