RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TMEM220Q6QAJ8 160 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 SLC16A9Q7RTY1 509 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 ADGRE4PQ86SQ3 457 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 FAM219AQ8IW50 185 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM106AQ96A25 262 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM18Q96B42 140 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM159Q96B96 161 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 OR10C1Q96KK4 312 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 MIEN1Q9BRT3 115 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 OR11A1Q9GZK7 315 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 PELI2Q9HAT8 420 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 DNAJC4Q9NNZ3 241 aa7.26□□□□□ -1.25
CSDE1-214ENST00000530886 MRM2Q9UI43 246 aaKnown RBP7.26□□□□□ -1.25
CSDE1-214ENST00000530886 CXorf51AA0A1B0GTR3 108 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 LEFTY1O75610 366 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ASGR1P07306 291 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 UMODP07911 640 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 AKR1C4P17516 323 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 FSTP19883 344 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 OR10J1P30954 320 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 FCGR2CP31995 323 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM33P57088 247 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 SGCGQ13326 291 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF260Q3ZCT1 412 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 KIRREL2Q6UWL6 708 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF429Q86V71 674 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 TGIF2LYQ8IUE0 185 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 MRPL41Q8IXM3 137 aaKnown RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 DCAF4L2Q8NA75 395 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 OR52E2Q8NGJ4 325 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 MFSD8Q8NHS3 518 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 RHBDD1Q8TEB9 315 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ZNRF4Q8WWF5 429 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 COMMD4Q9H0A8 199 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 KIAA1456Q9P272 454 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 C5AR2Q9P296 337 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 CPAMD8Q8IZJ3 1885 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 MUC22E2RYF6 1773 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 BORCS7-ASMTA0A0B4J1R7 106 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 PLRG1O43660 514 aaKnown RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 OPN1MWP04001 364 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 PGA3P0DJD8 388 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 OPN1MW2P0DN77 364 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 OPN1MW3P0DN78 364 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 TMEM225BP0DP42 221 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 IRF1P10914 325 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 HIST1H1CP16403 213 aaKnown RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 TLX1P31314 330 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 PRLHRP49683 370 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 RANP62826 216 aaKnown RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF616Q08AN1 781 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 OR1Q1Q15612 314 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF506Q5JVG8 444 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 CLEC18BQ6UXF7 455 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 SSX7Q7RTT5 188 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 COX18Q8N8Q8 333 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 NPEPL1Q8NDH3 523 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ZCCHC10Q8TBK6 192 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 CTDSP1Q9GZU7 261 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 PRM3Q9NNZ6 103 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ADAP2Q9NPF8 381 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 CLDN34H7C241 214 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ARPC3O15145 178 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 COCHO43405 550 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 APOBEC1P41238 236 aaKnown RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 LSSP48449 732 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 EIF2B1Q14232 305 aaKnown RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 EXOSC6Q5RKV6 272 aaKnown RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 VAX1Q5SQQ9 334 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 MORN1Q5T089 497 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 SLC25A24Q6NUK1 477 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 CATSPERDQ86XM0 798 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF248Q8NDW4 579 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 C16orf58Q96GQ5 468 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 LMF1Q96S06 567 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 NIPSNAP3BQ9BS92 247 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 KLF16Q9BXK1 252 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-214ENST00000530886 OR2J1Q9GZK6 312 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 IKZF2Q9UKS7 526 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 SRPK3Q9UPE1 567 aa7.25□□□□□ -1.25
CSDE1-214ENST00000530886 TRAV27A0A087WT01 109 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 TRBV11-1A0A0K0K1C0 115 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 FIGNL2A6NMB9 653 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 EFEMP2O95967 443 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 CYB5R3P00387 301 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-214ENST00000530886 SERPINA4P29622 427 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 GJA4P35212 333 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 SOX2P48431 317 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 CARD18P57730 90 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 SUPT4H1P63272 117 aaKnown RBP7.24□□□□□ -1.25
CSDE1-214ENST00000530886 LMAN2Q12907 356 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 MAP2K5Q13163 448 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 ARHGAP11BQ3KRB8 267 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 OR8G2PQ6IF36 304 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 FBXO46Q6PJ61 603 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-214ENST00000530886 ZNF627Q7L945 461 aa7.24□□□□□ -1.25
CSDE1-214ENST00000530886 MAML2Q8IZL2 1156 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-214ENST00000530886 APCDD1LQ8NCL9 501 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms