RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 C5orf63A6NC05 138 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 GMDSO60547 372 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 FSTL3O95633 263 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 HMGN1P05114 100 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 GNB2P62879 340 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 ZNF154Q13106 437 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 TIGD6Q17RP2 521 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 ZNF404Q494X3 552 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 PLBD1Q6P4A8 553 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 USP43Q70EL4 1123 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 KLBQ86Z14 1044 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 BPIFB2Q8N4F0 458 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 DEFB108BQ8NET1 73 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 OR8B3Q8NGG8 313 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 ZFAND2BQ8WV99 257 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 RNF133Q8WVZ7 376 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 DVL3Q92997 716 aaPredicted RBP11.16□□□□□ -0.62
VPS28-211ENST00000530790 ZMYND19Q96E35 227 aaPredicted RBP11.16□□□□□ -0.62
VPS28-211ENST00000530790 OR8B2Q96RD0 313 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 JMJD8Q96S16 334 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 TMEM246Q9BRR3 403 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 ABHD6Q9BV23 337 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 SUCNR1Q9BXA5 334 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 MARCH7Q9H992 704 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 FN3KRPQ9HA64 309 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 MMP26Q9NRE1 261 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 UFSP2Q9NUQ7 469 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 PPIAL4AQ9Y536 164 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
VPS28-211ENST00000530790 ANKRD30BLA7E2S9 258 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 PRODHO43272 600 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 FAM20BO75063 409 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 VENTXO95231 258 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 FSHBP01225 129 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 WNT2P09544 360 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 ZNF12P17014 697 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 PRKACGP22612 351 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 CFL1P23528 166 aaKnown RBP11.15□□□□□ -0.62
VPS28-211ENST00000530790 PMELP40967 661 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 HILS1P60008 231 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 MZT1Q08AG7 82 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 MPPED2Q15777 294 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 KLHL12Q53G59 568 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 FAM201AQ5SY85 155 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 DCDC5Q6ZRR9 648 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 RHOUQ7L0Q8 258 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.15□□□□□ -0.62
VPS28-211ENST00000530790 SPERTQ8NA61 448 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 PAPD5Q8NDF8 572 aaKnown RBP11.15□□□□□ -0.62
VPS28-211ENST00000530790 DNAJC9Q8WXX5 260 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 SPSB4Q96A44 273 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 NEIL1Q96FI4 390 aaPredicted RBP11.15□□□□□ -0.62
VPS28-211ENST00000530790 REEP6Q96HR9 211 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 SLC6A7Q99884 636 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 TMEM165Q9HC07 324 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 DNAJC27Q9NZQ0 273 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
VPS28-211ENST00000530790 TRAPPC2LH3BP13 241 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 SELENOFO60613 162 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 LYNP07948 512 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 H2BFMP0C1H6 154 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 DDOSTP39656 456 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 OPRL1P41146 370 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 PITPNBP48739 271 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 ZNF121P58317 390 aaPredicted RBP11.14□□□□□ -0.63
VPS28-211ENST00000530790 RPS7P62081 194 aaKnown RBP11.14□□□□□ -0.63
VPS28-211ENST00000530790 CDK5Q00535 292 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 KCNJ8Q15842 424 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 GFOD2Q3B7J2 385 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 BTNL3Q6UXE8 466 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 FAM57BQ71RH2 274 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 SLC16A9Q7RTY1 509 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 ZNF454Q8N9F8 522 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 OR52H1Q8NGJ2 320 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 OR8S1Q8NH09 359 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 OTOSQ8NHW6 89 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 NRBF2Q96F24 287 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 AMELYQ99218 206 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
VPS28-211ENST00000530790 OR10A2Q9H208 303 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 MMADHCQ9H3L0 296 aaPredicted RBP11.14□□□□□ -0.63
VPS28-211ENST00000530790 SLC25A19Q9HC21 320 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 PAPOLBQ9NRJ5 636 aaKnown RBP11.14□□□□□ -0.63
VPS28-211ENST00000530790 C14orf119Q9NWQ9 140 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 RNF7Q9UBF6 113 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 CLN8Q9UBY8 286 aa11.14□□□□□ -0.63
VPS28-211ENST00000530790 hCG_38984A0A1B0GV85 526 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 A6NLC8 198 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 HAX1O00165 279 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 PHYHO14832 338 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 GSC2O15499 205 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 TIPRLO75663 272 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 PTBP3O95758 552 aaKnown RBP11.13□□□□□ -0.63
VPS28-211ENST00000530790 FPR2P25090 351 aa11.13□□□□□ -0.63
VPS28-211ENST00000530790 NAA10P41227 235 aaPredicted RBP11.13□□□□□ -0.63
VPS28-211ENST00000530790 RASSF2P50749 326 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms