RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MALSU1Q96EH3 234 aa13.05□□□□□ -0.32
CAPN1-214ENST00000528165 ASB16Q96NS5 453 aa13.05□□□□□ -0.32
CAPN1-214ENST00000528165 SPSB2Q99619 263 aa13.05□□□□□ -0.32
CAPN1-214ENST00000528165 RTBDNQ9BSG5 229 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-214ENST00000528165 RAB33BQ9H082 229 aa13.05□□□□□ -0.32
CAPN1-214ENST00000528165 FREM3P0C091 2139 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 A6NCN8 305 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 PPIHO43447 177 aaKnown RBP13.04□□□□□ -0.32
CAPN1-214ENST00000528165 HCRTR2O43614 444 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 NUDT14O95848 222 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 IFNA17P01571 189 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 GAPDHP04406 335 aaKnown RBP13.04□□□□□ -0.32
CAPN1-214ENST00000528165 CHRM2P08172 466 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 GUK1Q16774 197 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 MIDNQ504T8 468 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 C9orf152Q5JTZ5 239 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 Q7L0L9 218 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 OOSP2Q86WS3 158 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 LINC00346Q8IVM7 164 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 RAB3CQ96E17 227 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 TOX2Q96NM4 488 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 CENPMQ9NSP4 180 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 FAM212BQ9NTI7 297 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-214ENST00000528165 FBXL17Q9UF56 701 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 SLC5A6Q9Y289 635 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 SNCAP37840 140 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 HTR5AP47898 357 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 SLC6A8P48029 635 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 IGLV3-21P80748 117 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-214ENST00000528165 ZNF616Q08AN1 781 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 IL15RAQ13261 267 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 NFATC4Q14934 902 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 RHEBQ15382 184 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 COMMD1Q8N668 190 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 OR1J1Q8NGS3 322 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 OR13C9Q8NGT0 318 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 WDR92Q96MX6 357 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 WDR77Q9BQA1 342 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-214ENST00000528165 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 FAM60AQ9NP50 221 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 CACNA1IQ9P0X4 2223 aa13.04□□□□□ -0.32
CAPN1-214ENST00000528165 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 IL33O95760 270 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 MT-ATP6P00846 226 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 GSTP1P09211 210 aaKnown RBP13.03□□□□□ -0.32
CAPN1-214ENST00000528165 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 NME1P15531 152 aaKnown RBP13.03□□□□□ -0.32
CAPN1-214ENST00000528165 FCGR2CP31995 323 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 PPP1CAP62136 330 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 FAM3AP98173 230 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 OPN5Q6U736 354 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 PEG10Q86TG7 708 aaKnown RBP13.03□□□□□ -0.32
CAPN1-214ENST00000528165 GKN2Q86XP6 184 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ZNF565Q8N9K5 539 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 RELTQ969Z4 430 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 AMDHD2Q9Y303 409 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 TMEM14DPA8MWL7 114 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 NME2P1O60361 137 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ZNF708P17019 499 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 CTNNB1P35222 781 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ZNF93P35789 620 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-214ENST00000528165 OR3A2P47893 321 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 P2RY4P51582 365 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ZNF117Q03924 483 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 TOMM34Q15785 309 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-214ENST00000528165 OR5D14Q8NGL3 314 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 CD300LFQ8TDQ1 290 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-214ENST00000528165 CNTNAP3Q9BZ76 1288 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 LMAN1LQ9HAT1 526 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 TREM2Q9NZC2 230 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 RHPN2P1A8MT19 583 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 SYT7O43581 403 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 MPIG6BO95866 241 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 AMY2BP19961 511 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 GLRA1P23415 457 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 TMEM33P57088 247 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 DEFA6Q01524 100 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 IAH1Q2TAA2 248 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-214ENST00000528165 OIT3Q8WWZ8 545 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 LPAR5Q9H1C0 372 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 FBLN5Q9UBX5 448 aa13.03□□□□□ -0.32
CAPN1-214ENST00000528165 ARHGEF17Q96PE2 2063 aaPredicted RBP13.02□□□□□ -0.32
CAPN1-214ENST00000528165 SOCS1O15524 211 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 HIST1H1DP16402 221 aaKnown RBP13.02□□□□□ -0.33
CAPN1-214ENST00000528165 PLAC9Q5JTB6 97 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 PPP1R3BQ86XI6 285 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-214ENST00000528165 ST7LQ8TDW4 575 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 ANAPC10Q9UM13 185 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 CLDN16Q9Y5I7 305 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 ARID1AO14497 2285 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 FIGNL2A6NMB9 653 aa13.02□□□□□ -0.33
CAPN1-214ENST00000528165 ZNF354AO60765 605 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-214ENST00000528165 ZNF217O75362 1048 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms