RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 TIGD4Q8IY51 512 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 C19orf18Q8NEA5 215 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 OR11L1Q8NGX0 322 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 OR5K1Q8NHB7 308 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 RNF133Q8WVZ7 376 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 PGAM5Q96HS1 289 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 TOR3AQ9H497 397 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
CAPN1-213ENST00000527897 NOP16Q9Y3C1 178 aaKnown RBP13.05□□□□□ -0.32
CAPN1-213ENST00000527897 J3QLI3 93 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 FAM20BO75063 409 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 APOC1P02654 83 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 GRPP07492 148 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 MRPL3P09001 348 aaKnown RBP13.04□□□□□ -0.32
CAPN1-213ENST00000527897 CD200P41217 278 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 CRISP1P54107 249 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 APOFQ13790 326 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 AMIGO2Q86SJ2 522 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 TEX29Q8N6K0 151 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 DEFB108BQ8NET1 73 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 UTP4Q969X6 686 aaKnown RBP13.04□□□□□ -0.32
CAPN1-213ENST00000527897 NRBF2Q96F24 287 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 REEP6Q96HR9 211 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 C19orf24Q9BVV8 132 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 OPA3Q9H6K4 179 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 MARCH7Q9H992 704 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 SLC25A19Q9HC21 320 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 MMP26Q9NRE1 261 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 KRT84Q9NSB2 600 aa13.04□□□□□ -0.32
CAPN1-213ENST00000527897 PPIAL4EA0A075B759 164 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-213ENST00000527897 A6NLC8 198 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 ANKRD30BLA7E2S9 258 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 PPIAL4DF5H284 164 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 G3V2T6 193 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 M0R129 80 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 PRODHO43272 600 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 GMDSO60547 372 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 MITFO75030 526 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-213ENST00000527897 CIB2O75838 187 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 PPIAL4FP0DN26 164 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 EPHA1P21709 976 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 GATA3P23771 443 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 FASP25445 335 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 OPRL1P41146 370 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 HCCSP53701 268 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 HOXA4Q00056 320 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-213ENST00000527897 SCGB2A2Q13296 93 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 FAHD1Q6P587 224 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 LRRN1Q6UXK5 716 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 SLC16A9Q7RTY1 509 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 DNAJC9Q8WXX5 260 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 TMEM246Q9BRR3 403 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 OR10A2Q9H208 303 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 SP140LQ9H930 580 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 FN3KRPQ9HA64 309 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 TMEM165Q9HC07 324 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 MRPL15Q9P015 296 aaKnown RBP13.03□□□□□ -0.32
CAPN1-213ENST00000527897 OR5V1Q9UGF6 321 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 LAMP5Q9UJQ1 280 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 KLHDC2Q9Y2U9 406 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 PPIAL4AQ9Y536 164 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 AP4S1Q9Y587 144 aa13.03□□□□□ -0.32
CAPN1-213ENST00000527897 A0A1B0GWJ7 208 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 hCG_1807616A0A1W2PRN6 198 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 F5H0A9 414 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-213ENST00000527897 TRAPPC2LH3BP13 241 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 GATA4P43694 442 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 GNB2P62879 340 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 PTGES3Q15185 160 aaKnown RBP13.02□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF181Q2M3W8 571 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 C1QL2Q7Z5L3 287 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 KRT77Q7Z794 578 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 KLBQ86Z14 1044 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 CELF2-AS1Q8N7Q2 184 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF454Q8N9F8 522 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 OR8S1Q8NH09 359 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 NANPQ8TBE9 248 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 C22orf15Q8WYQ4 148 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 LRTOMTQ8WZ04 291 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 SGK3Q96BR1 496 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 SSBP3Q9BWW4 388 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-213ENST00000527897 TTTY10Q9BZA0 68 aa13.02□□□□□ -0.33
CAPN1-213ENST00000527897 MMADHCQ9H3L0 296 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-213ENST00000527897 DOCK11Q5JSL3 2073 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 C3orf80F5H4A9 247 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 PSMD9O00233 223 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 WNT2P09544 360 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 CD80P33681 288 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 FAM3AP98173 230 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 OR8B8Q15620 311 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 ZNF404Q494X3 552 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 SFRP4Q6FHJ7 346 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-213ENST00000527897 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 ZDHHC13Q8IUH4 622 aa13.01□□□□□ -0.33
CAPN1-213ENST00000527897 OR8B3Q8NGG8 313 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms