RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ARRDC3Q96B67 414 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 SCGB3A2Q96PL1 93 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 LPAR4Q99677 370 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 SPHK2Q9NRA0 654 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 PPP1R14DQ9NXH3 145 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 MRPS23Q9Y3D9 190 aaKnown RBP11.16□□□□□ -0.62
TSKU-203ENST00000527881 H0YL77 283 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 GEMIN2O14893 280 aaKnown RBP11.16□□□□□ -0.62
TSKU-203ENST00000527881 HOXA2O43364 376 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 LMX1BO60663 402 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 MPIG6BO95866 241 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 SLC25A1P53007 311 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 TNFRSF9Q07011 255 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 PHF19Q5T6S3 580 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 KCTD18Q6PI47 426 aaPredicted RBP11.16□□□□□ -0.62
TSKU-203ENST00000527881 OTOSQ8NHW6 89 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 AQP3Q92482 292 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 PRRX2Q99811 253 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 DDA1Q9BW61 102 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 OR14J1Q9UGF5 321 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 HS3ST3B1Q9Y662 390 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 A0A087WUJ7 227 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 LOC107986453A0A1B0GWG9 222 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 XRCC2O43543 280 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 CT62P0C5K7 136 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 ASCL1P50553 236 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 PDGFRLQ15198 375 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 MFSD9Q8NBP5 474 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 ERGIC1Q969X5 290 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 SH3BGRL3Q9H299 93 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 CNTD2Q9H8S5 307 aa11.16□□□□□ -0.62
TSKU-203ENST00000527881 C14orf166Q9Y224 244 aaKnown RBP11.16□□□□□ -0.62
TSKU-203ENST00000527881 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
TSKU-203ENST00000527881 NUDT21O43809 227 aaKnown RBP11.15□□□□□ -0.62
TSKU-203ENST00000527881 SLC16A7O60669 478 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 AHSA1O95433 338 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 ZNF708P17019 499 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 DLK1P80370 383 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 ZP2Q05996 745 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 ASPHD2Q6ICH7 369 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 FAM166AQ6J272 317 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 POC1AQ8NBT0 407 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 LCN9Q8WX39 176 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 STACQ99469 402 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 METTL9Q9H1A3 318 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 TMEM74BQ9NUR3 256 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 MPDZO75970 2070 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 CNTRLQ7Z7A1 2325 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 ERVFRD-1P60508 538 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 FAM3AP98173 230 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 CDK3Q00526 305 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 RPL18Q07020 188 aaKnown RBP11.15□□□□□ -0.62
TSKU-203ENST00000527881 CEBPEQ15744 281 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 OR2L8Q8NGY9 312 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 FRZBQ92765 325 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 FGGYQ96C11 551 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 MRGPRX3Q96LB0 322 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 GNRHR2Q96P88 292 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 EHFQ9NZC4 300 aa11.15□□□□□ -0.62
TSKU-203ENST00000527881 P2RY10O00398 339 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 PRKNO60260 465 aaPredicted RBP11.15□□□□□ -0.63
TSKU-203ENST00000527881 CYBAP13498 195 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 NUBP1P53384 320 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 CSNK2A1P68400 391 aaPredicted RBP11.15□□□□□ -0.63
TSKU-203ENST00000527881 ELOBQ15370 118 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 C1orf189Q5VU69 101 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 SLC22A25Q6T423 547 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 MED25Q71SY5 747 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.15□□□□□ -0.63
TSKU-203ENST00000527881 PLPP5Q8NEB5 264 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 CSNK2A3Q8NEV1 391 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 METTL21AQ8WXB1 218 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.63
TSKU-203ENST00000527881 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.15□□□□□ -0.63
TSKU-203ENST00000527881 SNRNP200O75643 2136 aaKnown RBP11.14□□□□□ -0.63
TSKU-203ENST00000527881 IGLON5A6NGN9 336 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 CCL16O15467 120 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 DIRAS3O95661 229 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 JMJD7P0C870 316 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 FOSL2P15408 326 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 APLNRP35414 380 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 PLPP4Q5VZY2 271 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 PLXDC2Q6UX71 529 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 ZNF429Q86V71 674 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 M1APQ8TC57 530 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 FAM210BQ96KR6 192 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 RAB11FIP5Q9BXF6 653 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 PRODH2Q9UF12 536 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 DAPP1Q9UN19 280 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 TMED3Q9Y3Q3 217 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 PIAS3Q9Y6X2 628 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 KIF26BQ2KJY2 2108 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 MMP7P09237 267 aaPredicted RBP11.14□□□□□ -0.63
TSKU-203ENST00000527881 DANCRP0C864 163 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 PGA4P0DJD7 388 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 PGA5P0DJD9 388 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms