RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 LIPCP11150 499 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 IL2RGP31785 369 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 PTGER1P34995 402 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 NANOS3P60323 173 aaKnown RBP6.72□□□□□ -1.33
SOX6-208ENST00000527619 RAB1AP62820 205 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
SOX6-208ENST00000527619 EIF5AP63241 154 aaKnown RBP6.72□□□□□ -1.33
SOX6-208ENST00000527619 SLC22A6Q4U2R8 563 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 HEPN1Q6WQI6 88 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 TRAPPC5Q8IUR0 188 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 ZSCAN4Q8NAM6 433 aaPredicted RBP6.72□□□□□ -1.33
SOX6-208ENST00000527619 WFDC5Q8TCV5 224 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 FAM222BQ8WU58 562 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 WBP2Q969T9 261 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 C20orf24Q9BUV8 137 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 OR2AG1Q9H205 316 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 ZMAT3Q9HA38 289 aaKnown RBP6.72□□□□□ -1.33
SOX6-208ENST00000527619 MSL2Q9HCI7 577 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 PRSS16Q9NQE7 514 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 DOK5Q9P104 306 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 SLC23A2Q9UGH3 650 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 VSIG4Q9Y279 399 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 PRG3Q9Y2Y8 225 aaPredicted RBP6.72□□□□□ -1.33
SOX6-208ENST00000527619 NUP210LQ5VU65 1888 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 TRAV27A0A087WT01 109 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 RPL36A-HNRNPH2H7BZ11 118 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 DCTN6O00399 190 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 CCL25O15444 150 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 CDC40O60508 579 aaKnown RBP eCLIP6.72□□□□□ -1.33
SOX6-208ENST00000527619 LRP3O75074 770 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 MAS1P04201 325 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 GCH1P30793 250 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 GJA4P35212 333 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 SULT1A2P50226 295 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 ERVS71-1P61550 626 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 PPP1R1AQ13522 171 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 SMIM21Q3B7S5 101 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 UBE3DQ7Z6J8 389 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 TMEM150AQ86TG1 271 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 BIVMQ86UB2 503 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 FAM129CQ86XR2 697 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 NRROSQ86YC3 692 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 BPIFB2Q8N4F0 458 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 OR2AP1Q8NGE2 309 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 OR1J1Q8NGS3 322 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 OR13C8Q8NGS7 320 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 OR13D1Q8NGV5 346 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 FGF13Q92913 245 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 SCAMP4Q969E2 229 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 FAAP24Q9BTP7 215 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 RNF126Q9BV68 326 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 HINT2Q9BX68 163 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 NMES1Q9C002 83 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 RAB33BQ9H082 229 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 OR2S2Q9NQN1 319 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 CBLN4Q9NTU7 201 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 SEMA5BQ9P283 1151 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 B4GALT6Q9UBX8 382 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 SMPXQ9UHP9 88 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 FLVCR1Q9Y5Y0 555 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 V9GYS6 101 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 COL4A3Q01955 1670 aa6.72□□□□□ -1.33
SOX6-208ENST00000527619 MTCL1Q9Y4B5 1905 aaKnown RBP6.71□□□□□ -1.33
SOX6-208ENST00000527619 OR5H15A6NDH6 313 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 OR5H1A6NKK0 313 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 SCDO00767 359 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 ALOX12BO75342 701 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 MBPP02686 304 aaPredicted RBP6.71□□□□□ -1.34
SOX6-208ENST00000527619 IL6RP08887 468 aaPredicted RBP6.71□□□□□ -1.34
SOX6-208ENST00000527619 ACRP10323 421 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 F3P13726 295 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 ARR3P36575 388 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 RPS10P46783 165 aaKnown RBP6.71□□□□□ -1.34
SOX6-208ENST00000527619 SOX2P48431 317 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 PRLHRP49683 370 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 ERVFC1-1P60608 527 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 IL13RA1P78552 427 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 C5orf64Q2M2E5 130 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 LRRC73Q5JTD7 316 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 KIRREL2Q6UWL6 708 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 LYG1Q8N1E2 194 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 OR51D1Q8NGF3 324 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 TOMM40LQ969M1 308 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 BPIFA2Q96DR5 249 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 YPEL4Q96NS1 127 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 GPR87Q9BY21 358 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 SYT4Q9H2B2 425 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 SLC17A5Q9NRA2 495 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 WSB2Q9NYS7 404 aaPredicted RBP6.71□□□□□ -1.34
SOX6-208ENST00000527619 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 C13orf42A0A1B0GVH6 325 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 A0A1W2PNV4 684 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 SMCO3A2RU48 225 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 PPP1R2P9O14990 202 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 NDUFS4O43181 175 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 OR1F1O43749 312 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 ZIC2O95409 532 aaPredicted RBP6.71□□□□□ -1.34
SOX6-208ENST00000527619 CYB5AP00167 134 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 CTGFP29279 349 aa6.71□□□□□ -1.34
SOX6-208ENST00000527619 SLC6A6P31641 620 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms