RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 OR6N2Q8NGY6 317 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 TEX47Q8TBZ9 253 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 RNF133Q8WVZ7 376 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 SPSB4Q96A44 273 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 SSBP3Q9BWW4 388 aaPredicted RBP8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 OR51V1Q9H2C8 321 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 NTN4Q9HB63 628 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 LRCH1Q9Y2L9 728 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 PPIAL4AQ9Y536 164 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 ANK2Q01484 3957 aa8.71□□□□□ -1.02
PRPF40B-204ENST00000527253 IGHV3OR16-10A0A075B7F0 116 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 IGHV2-70DA0A0C4DH43 119 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 TMEM89A2RUT3 159 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 LRRC30A6NM36 301 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 ZNF878C9JN71 531 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 GYG2O15488 501 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 GMDSO60547 372 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 SELENOFO60613 162 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 FKBP6O75344 327 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 FCN3O75636 299 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 IGHV4-38-2P0DP08 117 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 ZNF3P17036 446 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 OPRL1P41146 370 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 CX3CR1P49238 355 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 BLVRAP53004 296 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 FAM3AP98173 230 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 CDK5Q00535 292 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 SCGB2A2Q13296 93 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 TMEM236Q5W0B7 351 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 PLBD1Q6P4A8 553 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 SLC16A9Q7RTY1 509 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 WDR86Q86TI4 376 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 SPATA24Q86W54 205 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 CPOQ8IVL8 374 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 BPIFB2Q8N4F0 458 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 SIGLECL1Q8N7X8 197 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 BOLLQ8N9W6 283 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 PAPD5Q8NDF8 572 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 BBS1Q8NFJ9 593 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 BCAS4Q8TDM0 211 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 FAM216AQ8WUB2 273 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 ERGIC1Q969X5 290 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 OTULINQ96BN8 352 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 ZMYND19Q96E35 227 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 NEIL1Q96FI4 390 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 C1orf147Q96MC9 270 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 INTS14Q96SY0 518 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 ADAT1Q9BUB4 502 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 SUCNR1Q9BXA5 334 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 C1orf123Q9NWV4 160 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 MRPL15Q9P015 296 aaKnown RBP8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 CTSZQ9UBR2 303 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 MIOXQ9UGB7 285 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 OR5V1Q9UGF6 321 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 NUP50Q9UKX7 468 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 POMPQ9Y244 141 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 KLHDC2Q9Y2U9 406 aa8.7□□□□□ -1.02
PRPF40B-204ENST00000527253 KIR2DS1A0A191URI9 304 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 hCG_38984A0A1B0GV85 526 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 C22orf46C9J442 243 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 TRIM77I1YAP6 450 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 LGALS8O00214 317 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 GNGT2O14610 69 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 TBX1O43435 398 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 GRPP07492 148 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 OSMP13725 252 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 EGR1P18146 543 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 SLC2A5P22732 501 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 CPT2P23786 658 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 PSMB10P40306 273 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 PITPNBP48739 271 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 HCCSP53701 268 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 ZNF121P58317 390 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 GNB2P62879 340 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 UBA52P62987 128 aaKnown RBP8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 GRB2P62993 217 aaKnown RBP8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 ELF3P78545 371 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 CBX1P83916 185 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 FLOT2Q14254 428 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 WDR25Q64LD2 544 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 SFRP4Q6FHJ7 346 aaPredicted RBP8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 DCDC5Q6ZRR9 648 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 FAM57BQ71RH2 274 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 C1orf87Q8N0U7 546 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 OR11L1Q8NGX0 322 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 RAB40AQ8WXH6 277 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 REEP6Q96HR9 211 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 MRI1Q9BV20 369 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 CADM1Q9BY67 442 aaKnown RBP8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 SLC22A4Q9H015 551 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 RASSF4Q9H2L5 321 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 FN3KRPQ9HA64 309 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 DNAJC27Q9NZQ0 273 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 RNF7Q9UBF6 113 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 DNAJB9Q9UBS3 223 aa8.69□□□□□ -1.02
PRPF40B-204ENST00000527253 PRR32B1ATL7 298 aa8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 PRR23D1E9PI22 279 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-204ENST00000527253 GSC2O15499 205 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms