RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 C19orf67A6NJJ6 358 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 TLX3O43711 291 aaPredicted RBP15.49■□□□□ 0.07
USH1C-205ENST00000527020 LIPCP11150 499 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 CTSSP25774 331 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 HRH1P35367 487 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 CD96P40200 585 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 SSR4P51571 173 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 ZNF133P52736 654 aaPredicted RBP15.49■□□□□ 0.07
USH1C-205ENST00000527020 LSM6P62312 80 aaKnown RBP15.49■□□□□ 0.07
USH1C-205ENST00000527020 GRB2P62993 217 aaKnown RBP15.49■□□□□ 0.07
USH1C-205ENST00000527020 TRA2AQ13595 282 aaKnown RBP eCLIP15.49■□□□□ 0.07
USH1C-205ENST00000527020 ENDOGQ14249 297 aaKnown RBP15.49■□□□□ 0.07
USH1C-205ENST00000527020 SGCAQ16586 387 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 C10orf128Q5T292 105 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 CRIP3Q6Q6R5 217 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 FOXL2NBQ6ZUU3 175 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 PGAP1Q75T13 922 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 OR2W3Q7Z3T1 314 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 DTX1Q86Y01 620 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 ZNF101Q8IZC7 436 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 OR2Y1Q8NGV0 311 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 OR14K1Q8NGZ2 314 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 ARL6Q9H0F7 186 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 KIF25Q9UIL4 384 aa15.49■□□□□ 0.07
USH1C-205ENST00000527020 A0A1W2PP11 408 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 RFPL4AA6NLU0 287 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 RFPL4AL1F8VTS6 287 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 B3GALNT1O75752 331 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 SCGNO76038 276 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 CRYZL1O95825 349 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 IGLV3-1P01715 115 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 ZBTB25P24278 435 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 CSNK1A1P48729 337 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 DSCR4P56555 118 aaPredicted RBP15.48■□□□□ 0.07
USH1C-205ENST00000527020 GFOD2Q3B7J2 385 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 PLAC9Q5JTB6 97 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 ZNF468Q5VIY5 522 aaPredicted RBP15.48■□□□□ 0.07
USH1C-205ENST00000527020 RAET1LQ5VY80 246 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 DOK3Q7L591 496 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 SLC25A42Q86VD7 318 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 MAML2Q8IZL2 1156 aaPredicted RBP15.48■□□□□ 0.07
USH1C-205ENST00000527020 DTWD2Q8NBA8 298 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 OR5M8Q8NGP6 311 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 NABP1Q96AH0 204 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 OR2AT4A6NND4 320 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 C9J4A7 227 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 I3L521 148 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 CDC14BO60729 498 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 RP2O75695 350 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 CD8AP01732 235 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 SRSF4Q08170 494 aaKnown RBP15.48■□□□□ 0.07
USH1C-205ENST00000527020 RSPO1Q2MKA7 263 aaPredicted RBP15.48■□□□□ 0.07
USH1C-205ENST00000527020 FAM209AQ5JX71 171 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 CLVS2Q5SYC1 327 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 TMEM123Q8N131 208 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 CST11Q9H112 138 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 NELFAQ9H3P2 528 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 FN3KRPQ9HA64 309 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 ZNF160Q9HCG1 818 aa15.48■□□□□ 0.07
USH1C-205ENST00000527020 LOC100509620A0A075B734 347 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 SMAD9O15198 467 aaKnown RBP15.47■□□□□ 0.07
USH1C-205ENST00000527020 SOCS1O15524 211 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 MPIG6BO95866 241 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 WDPCPO95876 746 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 HLA-AP01891 365 aaKnown RBP15.47■□□□□ 0.07
USH1C-205ENST00000527020 RPA2P15927 270 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 MSR1P21757 451 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 MLF1P58340 268 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 RIPPLY1Q0D2K3 151 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 ZMYND11Q15326 602 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 RPS19BP1Q86WX3 136 aaKnown RBP15.47■□□□□ 0.07
USH1C-205ENST00000527020 ZDHHC22Q8N966 263 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 ZIC4Q8N9L1 334 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 BANF2Q9H503 90 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 IFT46Q9NQC8 304 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 ANAPC10Q9UM13 185 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 MUC3AQ02505 3323 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 CNTRLQ7Z7A1 2325 aa15.47■□□□□ 0.07
USH1C-205ENST00000527020 A0A0J9YW62 118 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 OR5H15A6NDH6 313 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 STK17BO94768 372 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 IL2RAP01589 272 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 CHRM2P08172 466 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 CD34P28906 385 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 TMEM50BP56557 158 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 GMFBP60983 142 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 PPP1R1AQ13522 171 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 DMRTC1Q5HYR2 192 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 ALKAL2Q6UX46 152 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 LYG2Q86SG7 212 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 OR9K2Q8NGE7 335 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 LIN37Q96GY3 246 aaPredicted RBP15.46■□□□□ 0.07
USH1C-205ENST00000527020 JSRP1Q96MG2 331 aaPredicted RBP15.46■□□□□ 0.07
USH1C-205ENST00000527020 REG4Q9BYZ8 158 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 DKKL1Q9UK85 242 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 TMA7Q9Y2S6 64 aaKnown RBP15.46■□□□□ 0.07
USH1C-205ENST00000527020 FREM2Q5SZK8 3169 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 EIF1BO60739 113 aaKnown RBP15.46■□□□□ 0.07
USH1C-205ENST00000527020 HCKP08631 526 aa15.46■□□□□ 0.07
USH1C-205ENST00000527020 NMBP08949 121 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms