RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 MCUBQ9NWR8 336 aa2.8□□□□□ -1.96
CD44-223ENST00000526553 DEC1Q9P2X7 70 aa2.8□□□□□ -1.96
CD44-223ENST00000526553 AKAP12Q02952 1782 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ARHGEF10O15013 1369 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 CEP350Q5VT06 3117 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 GAKO14976 1311 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 GSTTP1A0A1W2PQM5 241 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 A6NDX4 124 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 CENPXA8MT69 81 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 K7EMT4 169 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 CDC40O60508 579 aaKnown RBP eCLIP2.79□□□□□ -1.96
CD44-223ENST00000526553 SUPT3HO75486 399 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 SCELO95171 688 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 TGM6O95932 706 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 GNAO1P09471 354 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ADRB3P13945 408 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 GGT1P19440 569 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 PMCHP20382 165 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 MAS1LP35410 378 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 NBL1P41271 181 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ZNF121P58317 390 aaPredicted RBP2.79□□□□□ -1.96
CD44-223ENST00000526553 LCN2P80188 198 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 CDH17Q12864 832 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 UNC119Q13432 240 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ZSCAN26Q16670 478 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ZNF691Q5VV52 312 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ADNP2Q6IQ32 1131 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 WDR82Q6UXN9 313 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 SLC35D2Q76EJ3 337 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 MRPL55Q7Z7F7 128 aaKnown RBP2.79□□□□□ -1.96
CD44-223ENST00000526553 ZNF429Q86V71 674 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ZNF547Q8IVP9 402 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 VKORC1L1Q8N0U8 176 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 FAM58AQ8N1B3 248 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 STPG2Q8N412 459 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 CBR4Q8N4T8 237 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 Q8N9W7 124 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 NOXO1Q8NFA2 376 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 OR52E2Q8NGJ4 325 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 OR51G1Q8NGK1 321 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 OR13C9Q8NGT0 318 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 ISOC2Q96AB3 205 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 NTAN1Q96AB6 310 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 APH1AQ96BI3 265 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 HAUS4Q9H6D7 363 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 TP53TG5Q9Y2B4 290 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 MRPS18BQ9Y676 258 aaKnown RBP2.79□□□□□ -1.96
CD44-223ENST00000526553 UTRNP46939 3433 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 KNDC1Q76NI1 1749 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 THSD7AQ9UPZ6 1657 aa2.79□□□□□ -1.96
CD44-223ENST00000526553 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 DISP2A7MBM2 1401 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 SBNO1A3KN83 1393 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 IGLV11-55A0A075B6I3 123 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 IGKV2D-24A0A075B6R9 120 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 A0A1W2PRF3 423 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 A0A1W2PRM7 423 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 CIB4A0PJX0 185 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PLAC8L1A1L4L8 177 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 SLC22A20A6NK97 555 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PLPP1O14494 284 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 KDELR3O43731 214 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 IGLV2-23P01705 113 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 ERGP11308 486 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 RAB5AP20339 215 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PTNP21246 168 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 GABRR2P28476 465 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 CASQ1P31415 396 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 CEACAM6P40199 344 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 CSKP41240 450 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 CDKN2BP42772 138 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 RND2P52198 227 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 CLDN6P56747 220 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PFN3P60673 137 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 ART3Q13508 389 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 TFDP2Q14188 446 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 C16orf72Q14CZ0 275 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PSG5Q15238 335 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 POU2AF1Q16633 256 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 C5orf64Q2M2E5 130 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PTPN20Q4JDL3 420 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 FBXO48Q5FWF7 155 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 ABHD12BQ7Z5M8 362 aaPredicted RBP2.78□□□□□ -1.96
CD44-223ENST00000526553 UNC93AQ86WB7 457 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 HORMAD1Q86X24 394 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 CBLN2Q8IUK8 224 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 PDCL2Q8N4E4 241 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 FBXO36Q8NEA4 188 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 OR51F2Q8NH61 342 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 RPEQ96AT9 228 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 WFIKKN1Q96NZ8 548 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 SIKE1Q9BRV8 207 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 SLC25A2Q9BXI2 301 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 SLC17A9Q9BYT1 436 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 UVRAGQ9P2Y5 699 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 TRMT112Q9UI30 125 aaKnown RBP2.78□□□□□ -1.96
CD44-223ENST00000526553 ZNF223Q9UK11 482 aaPredicted RBP2.78□□□□□ -1.96
CD44-223ENST00000526553 FLVCR2Q9UPI3 526 aa2.78□□□□□ -1.96
CD44-223ENST00000526553 STK38LQ9Y2H1 464 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms