RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 IGFBP1P08833 259 aaPredicted RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 TSPAN19P0C672 248 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF182P17025 639 aaPredicted RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF26P17031 533 aaPredicted RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF43P17038 809 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 CDH2P19022 906 aaPredicted RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 IGFBP5P24593 272 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SLC6A6P31641 620 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 VHLP40337 213 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ETV1P50549 477 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 CRISP1P54107 249 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 PRPS1P60891 318 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ESRRGP62508 458 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 PPP2R2BQ00005 443 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 CDK5Q00535 292 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 MYBPC1Q00872 1141 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 RPL18Q07020 188 aaKnown RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 RASGEF1BQ0VAM2 473 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 PDK3Q15120 406 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 PON3Q15166 354 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 PTGES3Q15185 160 aaKnown RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 FAM76BQ5HYJ3 339 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 C1orf185Q5T7R7 199 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 OR2A2Q6IF42 318 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ETFRF1Q6IPR1 90 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 RPL13AP3Q6NVV1 102 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 DPY19L2P2Q6ZN68 376 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 Q6ZPB1 254 aaPredicted RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 FCRLAQ7L513 359 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 NANOGNBQ7Z5D8 188 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 DOLPP1Q86YN1 238 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 MCEMP1Q8IX19 187 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ELMOD2Q8IZ81 293 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 DHRSXQ8N5I4 330 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 CLDN22Q8N7P3 220 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF555Q8NEP9 628 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 TEX47Q8TBZ9 253 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SAMD8Q96LT4 415 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 TSSK6Q9BXA6 273 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 C1QTNF5Q9BXJ0 243 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SRXN1Q9BYN0 137 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 OR52D1Q9H346 318 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 RIBC2Q9H4K1 309 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 EGLN3Q9H6Z9 239 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 MCCC2Q9HCC0 563 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 INIPQ9NRY2 104 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SEC14L4Q9UDX3 406 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ENOPH1Q9UHY7 261 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ZNF346Q9UL40 294 aaKnown RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 MCTS1Q9ULC4 181 aaKnown RBP3.88□□□□□ -1.79
USP48-211ENST00000526044 BAIAP2Q9UQB8 552 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 SIGLEC7Q9Y286 467 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 IER3IP1Q9Y5U9 82 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 ARHGAP21Q5T5U3 1957 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 LOC400499M0QZD8 3231 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 CELSR3Q9NYQ7 3312 aa3.88□□□□□ -1.79
USP48-211ENST00000526044 DNAJC13O75165 2243 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ZNF407Q9C0G0 2248 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CFAP47Q6ZTR5 3102 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 TRGV8A0A0C4DH27 118 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 LOC100130705A0A1B0GUX0 176 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 A0A1W2PNV4 684 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CCL21O00585 134 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 GPR171O14626 319 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 IMPA2O14732 288 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ARPC3O15145 178 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ARHGEF9O43307 516 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 IDH3BO43837 385 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 PAGE4O60829 102 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 RAMP1O60894 148 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 MRPL33O75394 65 aaKnown RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 AQP8O94778 261 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SOX14O95416 240 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SNAP29O95721 258 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 TGM6O95932 706 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 BCL10O95999 233 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 PLGP00747 810 aaPredicted RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 PRB1P04280 392 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 YES1P07947 543 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CD14P08571 375 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 HLA-DOBP13765 273 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ACADSP16219 412 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 KLK2P20151 261 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 TIMP3P35625 211 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ACVR1BP36896 505 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 POLR2IP36954 125 aaKnown RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 DAP3P51398 398 aaKnown RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 P2RY4P51582 365 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SMSP52788 366 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 CLDN17P56750 224 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 RPS4XP62701 263 aaKnown RBP3.87□□□□□ -1.79
USP48-211ENST00000526044 ERVK-25P63136 954 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 PUDPQ08623 228 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 GINS1Q14691 196 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SLC17A1Q14916 467 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 IGFBP7Q16270 282 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SNAPC1Q16533 368 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 SLC36A3Q495N2 470 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 KCTD21Q4G0X4 260 aa3.87□□□□□ -1.79
USP48-211ENST00000526044 ACSF3Q4G176 576 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms