RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TRAM2Q15035 370 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SGCBQ16585 318 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MICAQ29983 383 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MESTQ5EB52 335 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 FAM69AQ5T7M9 428 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OTPQ5XKR4 325 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 LPCAT4Q643R3 524 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 FAHD1Q6P587 224 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TTC33Q6PID6 262 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 PAQR6Q6TCH4 344 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF730Q6ZMV8 503 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TMPRSS11FQ6ZWK6 438 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MBOAT2Q6ZWT7 520 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 FCRLAQ7L513 359 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 FAM122BQ7Z309 247 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 HAPLN4Q86UW8 402 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ICA1LQ8NDH6 482 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR10G2Q8NGC3 310 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR13C2Q8NGS9 318 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR4Q3Q8NH05 313 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR5J2Q8NH18 312 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR51A7Q8NH64 312 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF519Q8TB69 540 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ZNRF4Q8WWF5 429 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ITLN2Q8WWU7 325 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 HTRA1Q92743 480 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TRIM63Q969Q1 353 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CPNE4Q96A23 557 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 INTS12Q96CB8 462 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 STARD4Q96DR4 205 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 BPIFA2Q96DR5 249 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SGTBQ96EQ0 304 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MPP4Q96JB8 637 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 RAB3IPQ96QF0 476 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TSPAN32Q96QS1 320 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TNFRSF13CQ96RJ3 184 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 FEVQ99581 238 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SLC29A1Q99808 456 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CIB1Q99828 191 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 PCGF1Q9BSM1 259 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 DCTN5Q9BTE1 182 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 EMC6Q9BV81 110 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 FNDC11Q9BVV2 318 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SLC19A3Q9BZV2 496 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 UCK2Q9BZX2 261 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TRIM15Q9C019 465 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 GABARAPL1Q9H0R8 117 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OPN3Q9H1Y3 402 aaPredicted RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 OR52D1Q9H346 318 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ANKRD19PQ9H560 264 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CALHM2Q9HA72 323 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CACYBPQ9HB71 228 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MCCC2Q9HCC0 563 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 CHST11Q9NPF2 352 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SERINC1Q9NRX5 453 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MED29Q9NX70 200 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MRPL39Q9NYK5 338 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 DNAJB9Q9UBS3 223 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF229Q9UJW7 825 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SLC13A4Q9UKG4 626 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF346Q9UL40 294 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 TRAPPC4Q9Y296 219 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 MED31Q9Y3C7 131 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 HDGFL3Q9Y3E1 203 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 SAMHD1Q9Y3Z3 626 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 FLVCR1Q9Y5Y0 555 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 DSCAMO60469 2012 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ZANQ9Y493 2812 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 YLPM1P49750 1951 aaKnown RBP2.52□□□□□ -2.01
CSDE1-208ENST00000524652 ROS1P08922 2347 aa2.52□□□□□ -2.01
CSDE1-208ENST00000524652 AKAP6Q13023 2319 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 TANC2Q9HCD6 1990 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 A0A1W2PP11 408 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 ARRDC5A6NEK1 342 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 EIF4E1BA6NMX2 242 aaKnown RBP2.51□□□□□ -2.01
CSDE1-208ENST00000524652 GJE1A6NN92 205 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF724A8MTY0 619 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 EFCAB9A8MZ26 197 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 FAM90A26D6RGX4 464 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 H7C1C5 153 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 M0R129 80 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 DCTN6O00399 190 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 BHLHE40O14503 412 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 EI24O14681 340 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 CASQ2O14958 399 aaPredicted RBP2.51□□□□□ -2.01
CSDE1-208ENST00000524652 OR2T1O43869 369 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 MGRN1O60291 552 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 UPK3AO75631 287 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 SEC14L2O76054 403 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 CCNB2O95067 398 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 SLC2A10O95528 541 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 CLDN1O95832 211 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 MT-ATP6P00846 226 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 IGHV3-9P01782 118 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 IGHMP01871 453 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 PGA4P0DJD7 388 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 PGA3P0DJD8 388 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 ADORA3P0DMS8 318 aa2.51□□□□□ -2.01
CSDE1-208ENST00000524652 SAGP10523 405 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms