RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SLC25A47Q6Q0C1 308 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR2W3Q7Z3T1 314 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ABHD12BQ7Z5M8 362 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR10G3Q8NGC4 313 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR8B12Q8NGG6 310 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR2I1PQ8NGU4 316 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 CASTOR1Q8WTX7 329 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 DNASE2BQ8WZ79 361 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 C1orf147Q96MC9 270 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 OR6C1Q96RD1 312 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF471Q9BX82 626 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 METTL7AQ9H8H3 244 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 MRPS28Q9Y2Q9 187 aaKnown RBP9.81□□□□□ -0.84
HDAC9-228ENST00000524023 B3GALT1Q9Y5Z6 326 aa9.81□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF814B7Z6K7 855 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 SULT2B1O00204 365 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 OR2J2O76002 312 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 DUS4LO95620 317 aaKnown RBP9.8□□□□□ -0.84
HDAC9-228ENST00000524023 IGFBP4P22692 258 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ANOS1P23352 680 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF121P58317 390 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-228ENST00000524023 GABREP78334 506 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 CARD17Q5XLA6 110 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 KCTD9Q7L273 389 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 CPEB2Q7Z5Q1 589 aaKnown RBP9.8□□□□□ -0.84
HDAC9-228ENST00000524023 COMMD2Q86X83 199 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 HOGA1Q86XE5 327 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 TMEM104Q8NE00 496 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 OR4K15Q8NH41 348 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 THAP6Q8TBB0 222 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 MARCH1Q8TCQ1 289 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 FBXW5Q969U6 566 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 PHYHIPLQ96FC7 376 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 GPR84Q9NQS5 396 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF319Q9P2F9 582 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 MYOTQ9UBF9 498 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ASH2LQ9UBL3 628 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ANAPC10Q9UM13 185 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 MED12Q93074 2177 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 DBX1A6NMT0 343 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 EEF1E1-BLOC1S5C9J1V9 151 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 SOCS1O15524 211 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 SCRG1O75711 98 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ZFAND5O76080 213 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 MPIG6BO95866 241 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 GSTP1P09211 210 aaKnown RBP9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF17P17021 662 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 NAT1P18440 290 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 DCDP81605 110 aaKnown RBP9.8□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF273Q14593 569 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 MICBQ29980 383 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 PLAC9Q5JTB6 97 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 PGAP1Q75T13 922 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 OR2M3Q8NG83 312 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 OR6X1Q8NH79 312 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 KCNG3Q8TAE7 436 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 TMEM41AQ96HV5 264 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 OR5B2Q96R09 309 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 GAREM1Q9H706 876 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 PNRC2Q9NPJ4 139 aaKnown RBP9.8□□□□□ -0.84
HDAC9-228ENST00000524023 MBD2Q9UBB5 411 aa9.8□□□□□ -0.84
HDAC9-228ENST00000524023 MRPS17Q9Y2R5 130 aaKnown RBP9.8□□□□□ -0.84
HDAC9-228ENST00000524023 NCOA6Q14686 2063 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-228ENST00000524023 RER1O15258 196 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 CDC14BO60729 498 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 APOC3P02656 99 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 CNR1P21554 472 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 OR3A4PP47883 348 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 TMEM50BP56557 158 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 TAS2R31P59538 309 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 SHBQ15464 509 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 NAA40Q86UY6 237 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 INO80EQ8NBZ0 244 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-228ENST00000524023 TERB2Q8NHR7 220 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 ELP5Q8TE02 316 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 RAB3CQ96E17 227 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 FAM71F1Q96KD3 344 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-228ENST00000524023 OXGR1Q96P68 337 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 C12orf4Q9NQ89 552 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 EML6Q6ZMW3 1958 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 CACNA1EQ15878 2313 aa9.79□□□□□ -0.84
HDAC9-228ENST00000524023 A0A1W2PP11 408 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 RAMP1O60894 148 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 CRHP06850 196 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 QDPRP09417 244 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 HIST1H1DP16402 221 aaKnown RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 ZNF43P17038 809 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 CCL1P22362 96 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 PSMB6P28072 239 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 CX3CR1P49238 355 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 PPIAP62937 165 aaKnown RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 SNTB1Q13884 538 aaKnown RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 KCNMB1Q16558 191 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 HIST3H3Q16695 136 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 PAN3Q58A45 887 aaKnown RBP9.78□□□□□ -0.84
HDAC9-228ENST00000524023 ELP2Q6IA86 826 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 ATRAIDQ6UW56 229 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 SPSB2Q99619 263 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 TMEM59Q9BXS4 323 aa9.78□□□□□ -0.84
HDAC9-228ENST00000524023 BANF2Q9H503 90 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms