RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 ZNF160Q9HCG1 818 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 HMG20AQ9NP66 347 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 ZNRD1Q9P1U0 126 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 TMEM14AQ9Y6G1 99 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 ARFGEF2Q9Y6D5 1785 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 TENM4Q6N022 2769 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 SPTA1P02549 2419 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 PLXNA1Q9UIW2 1896 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 ANKRD30AQ9BXX3 1397 aa2.22□□□□□ -2.05
PCM1-220ENST00000523896 CREBBPQ92793 2442 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 SSC5DA1L4H1 1573 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 SMCO2A6NFE2 343 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 NUPL2O15504 423 aaKnown RBP2.21□□□□□ -2.06
PCM1-220ENST00000523896 FKBP6O75344 327 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 OR2F2O95006 317 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 H6PDO95479 791 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 RHOXF2BP0C7M4 288 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 CT45A6P0DMU7 189 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 CT45A5P0DMU8 189 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 CT45A7P0DMV0 189 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 WARSP23381 471 aaKnown RBP2.21□□□□□ -2.06
PCM1-220ENST00000523896 NBL1P41271 181 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 RND2P52198 227 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 LOXL1Q08397 574 aaPredicted RBP2.21□□□□□ -2.06
PCM1-220ENST00000523896 SELENBP1Q13228 472 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 QPRTQ15274 297 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 RGNQ15493 299 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 STK11Q15831 433 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 MRPL23Q16540 153 aaKnown RBP2.21□□□□□ -2.06
PCM1-220ENST00000523896 DDX60LQ5H9U9 1706 aaKnown RBP2.21□□□□□ -2.06
PCM1-220ENST00000523896 CT45A1Q5HYN5 189 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 SOHLH1Q5JUK2 328 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 UBE2UQ5VVX9 321 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 NTM-AS1Q6ZSK4 140 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 RIMKLAQ8IXN7 391 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 PRSS58Q8IYP2 241 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 KMT2EQ8IZD2 1858 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 TTC5Q8N0Z6 440 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 BBS5Q8N3I7 341 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 ANKRD31Q8N7Z5 1873 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 CT45A3Q8NHU0 189 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 NTAN1Q96AB6 310 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 DNAJC1Q96KC8 554 aaKnown RBP2.21□□□□□ -2.06
PCM1-220ENST00000523896 CHP1Q99653 195 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 SPIN2AQ99865 258 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 SPIN2BQ9BPZ2 258 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 UPF3BQ9BZI7 483 aaKnown RBP2.21□□□□□ -2.06
PCM1-220ENST00000523896 FAM192AQ9GZU8 254 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 C12orf10Q9HB07 376 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 ZNF355PQ9NSJ1 428 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 MTCH1Q9NZJ7 389 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 CTSFQ9UBX1 484 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 VANGL2Q9ULK5 521 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 POLQO75417 2590 aa2.21□□□□□ -2.06
PCM1-220ENST00000523896 COL5A3P25940 1745 aaPredicted RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 NRXN2Q9P2S2 1712 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 MYOM3Q5VTT5 1437 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 PRRC2BQ5JSZ5 2229 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 IGLV1-36A0A0B4J1U3 117 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 TMEM223A0PJW6 202 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 LSM1O15116 133 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 SCAMP2O15127 329 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 EIF4E2O60573 245 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 SERPINE2P07093 398 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 PMELP40967 661 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 CX3CR1P49238 355 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 STXBP1P61764 594 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 RPS15P62841 145 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 ALKBH6Q3KRA9 238 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 ABCA11PQ4W5N1 156 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 SPANXN2Q5MJ10 180 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 FBXW9Q5XUX1 488 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 PLET1Q6UQ28 207 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 CENPQQ7L2Z9 268 aaPredicted RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 SCD5Q86SK9 330 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 WDR86Q86TI4 376 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 UBALD2Q8IYN6 164 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 C15orf40Q8WUR7 153 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 CAPSLQ8WWF8 208 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 MCUR1Q96AQ8 359 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 MICU1Q9BPX6 476 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 TMEM185BQ9H7F4 350 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 NTN4Q9HB63 628 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 DCAF16Q9NXF7 216 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 CCDC59Q9P031 241 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 FAM208AQ9UK61 1670 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 DSPP15924 2871 aaKnown RBP2.2□□□□□ -2.06
PCM1-220ENST00000523896 FBN2P35556 2912 aa2.2□□□□□ -2.06
PCM1-220ENST00000523896 ANKRD50Q9ULJ7 1429 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 FRYLO94915 3013 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 UBR5O95071 2799 aaPredicted RBP2.19□□□□□ -2.06
PCM1-220ENST00000523896 A0A075B6Q4 140 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 A0A0U1RQV1 116 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 TMEM150BA6NC51 233 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 SMKR1H3BMG3 65 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 RAD51BO15315 384 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 EIF3HO15372 352 aaKnown RBP eCLIP2.19□□□□□ -2.06
PCM1-220ENST00000523896 CLDN11O75508 207 aa2.19□□□□□ -2.06
PCM1-220ENST00000523896 GCM2O75603 506 aaPredicted RBP2.19□□□□□ -2.06
PCM1-220ENST00000523896 AQP8O94778 261 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms