RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CD47Q08722 323 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TAF11Q15544 211 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC9A3R2Q15599 337 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TMEM255AQ5JRV8 349 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 KLF17Q5JT82 389 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 PAGE3Q5JUK9 113 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF613Q6PF04 617 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 C17orf107Q6ZR85 190 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 RFPL4BQ6ZWI9 263 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 RRM2BQ7LG56 351 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 DPPA2Q7Z7J5 298 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 RBM45Q8IUH3 476 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 MSRB3Q8IXL7 192 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 SPICQ8N5J4 248 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 NOXO1Q8NFA2 376 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 OR2Z1Q8NG97 314 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 OR52E2Q8NGJ4 325 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 OR6T1Q8NGN1 323 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 KLF14Q8TD94 323 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 C1orf147Q96MC9 270 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 CCT8L2Q96SF2 557 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TMEM109Q9BVC6 243 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 IKZF5Q9H5V7 419 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 CCDC167Q9P0B6 97 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 OR5V1Q9UGF6 321 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC7A7Q9UM01 511 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 PCDHGB5Q9Y5G0 923 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 NPTNQ9Y639 398 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TRRAPQ9Y4A5 3859 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 TGP01266 2768 aa4.39□□□□□ -1.71
CTNNA1-239ENST00000523685 ARHGAP32A7KAX9 2087 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 LOC100509620A0A075B734 347 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 IGKV1D-43A0A0B4J1Z2 117 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 IGHV3-64DA0A0J9YX35 117 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 A0A1W2PPH5 198 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 M0QX08 132 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 FMO6PO60774 539 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 SHOX2O60902 331 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 SNNO75324 88 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ERLIN1O75477 346 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 TGDSO95455 350 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 NGFP01138 241 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 IGHV2-70P01814 119 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 THY1P04216 161 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 CRYBA1P05813 215 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 MMP7P09237 267 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ACADSP16219 412 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF12P17014 697 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PPIBP23284 216 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 AQP2P41181 271 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ARHGDIAP52565 204 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 BTG1P62324 171 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PSG4Q00888 419 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 RPL18Q07020 188 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ZMYND11Q15326 602 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 NPTX1Q15818 432 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 DUSP7Q16829 419 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 CYP51A1Q16850 503 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ESCO2Q56NI9 601 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 LRIF1Q5T3J3 769 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ASPHD1Q5U4P2 390 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF774Q6NX45 483 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 C1orf94Q6P1W5 598 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 UNQ6126/PRO20091Q6UXV3 157 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 MOB3CQ70IA8 216 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF575Q86XF7 245 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 EGFL6Q8IUX8 553 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PARP8Q8N3A8 854 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 KIR3DL3Q8N743 410 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 C11orf65Q8NCR3 313 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 OR4D11Q8NGI4 311 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 MOSPD2Q8NHP6 518 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PFN4Q8NHR9 129 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC26A7Q8TE54 656 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ADAMTS16Q8TE57 1224 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 HDAC2Q92769 488 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 TMIGD2Q96BF3 282 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 SPDL1Q96EA4 605 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 POM121L2Q96KW2 1035 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ARHGDIGQ99819 225 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PKP2Q99959 881 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 SLC19A3Q9BZV2 496 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 VIPAS39Q9H9C1 493 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 NANOGQ9H9S0 305 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 SIAEQ9HAT2 523 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PATZ1Q9HBE1 687 aaKnown RBP4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 SLCO1B3Q9NPD5 702 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 INIPQ9NRY2 104 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 CYSLTR2Q9NS75 346 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 TMEM106BQ9NUM4 274 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 NKIRAS1Q9NYS0 192 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 VAPAQ9P0L0 249 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 ZNF229Q9UJW7 825 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 INSIG2Q9Y5U4 225 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 USH1CQ9Y6N9 552 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PKD1L1Q8TDX9 2849 aa4.38□□□□□ -1.71
CTNNA1-239ENST00000523685 PPIAL4EA0A075B759 164 aa4.37□□□□□ -1.71
CTNNA1-239ENST00000523685 PPIAL4CA0A0B4J2A2 164 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms