RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 C11orf88Q6PI97 169 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 ZNF730Q6ZMV8 503 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 NDUFA11Q86Y39 141 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 LY6G5BQ8NDX9 201 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 BEND2Q8NDZ0 799 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 SLC7A13Q8TCU3 470 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 ACOT11Q8WXI4 607 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-211ENST00000523441 FAM234AQ9H0X4 552 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 KAT8Q9H7Z6 458 aaKnown RBP9.47□□□□□ -0.89
SDCBP-211ENST00000523441 ELL3Q9HB65 397 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-211ENST00000523441 SRA1Q9HD15 236 aaKnown RBP9.47□□□□□ -0.89
SDCBP-211ENST00000523441 NKIRAS1Q9NYS0 192 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 VSX1Q9NZR4 365 aaPredicted RBP9.47□□□□□ -0.89
SDCBP-211ENST00000523441 ZNF391Q9UJN7 358 aa9.47□□□□□ -0.89
SDCBP-211ENST00000523441 ADARB2-AS1A8MUL3 147 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 H0YAE9 185 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 CDC42EP2O14613 210 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 PPP1R3DO95685 299 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 IGF2P01344 180 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 HLA-DQA2P01906 255 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 NDUFB7P17568 137 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 ANOS1P23352 680 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 RAB13P51153 203 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 UBE2E1P51965 193 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 CSNK2BP67870 215 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 ZNF92Q03936 586 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 TRAP1Q12931 704 aaKnown RBP9.46□□□□□ -0.9
SDCBP-211ENST00000523441 TMEM95Q3KNT9 176 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 SNAI3Q3KNW1 292 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 LRRC10Q5BKY1 277 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 RABL3Q5HYI8 236 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 PTCHD4Q6ZW05 846 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 SLC36A1Q7Z2H8 476 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 TMEM219Q86XT9 240 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 ZNF454Q8N9F8 522 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 OR8S1Q8NH09 359 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 FAM46AQ96IP4 442 aaKnown RBP9.46□□□□□ -0.9
SDCBP-211ENST00000523441 FNDC11Q9BVV2 318 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 ZNF702PQ9H963 129 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 PRPF19Q9UMS4 504 aaKnown RBP9.46□□□□□ -0.9
SDCBP-211ENST00000523441 A4GNTQ9UNA3 340 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 IER3IP1Q9Y5U9 82 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 SNX13Q9Y5W8 968 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 GMEB1Q9Y692 573 aa9.46□□□□□ -0.9
SDCBP-211ENST00000523441 TRBV23-1A0A0A0MS06 115 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-211ENST00000523441 A0A1B0GWJ7 208 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 DCTN6O00399 190 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 BHLHE40O14503 412 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 GMDSO60547 372 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 SDHAP31040 664 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 IFNA8P32881 189 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 PRKCDQ05655 676 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 ZBED5Q49AG3 693 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 CYBRD1Q53TN4 286 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 GLYATL3Q5SZD4 288 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 METAP1DQ6UB28 335 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-211ENST00000523441 CCDC121Q6ZUS5 278 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 DPY19L4Q7Z388 723 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 FAM185AQ8N0U4 392 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 MREGQ8N565 214 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 OR56B2PQ8NGI1 322 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 OR9Q1Q8NGQ5 310 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 OR2AJ1Q8NGZ0 328 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 TNFRSF14Q92956 283 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 PRRC1Q96M27 445 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 ATF6BQ99941 703 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 POLR2J2Q9GZM3 115 aaKnown RBP9.45□□□□□ -0.9
SDCBP-211ENST00000523441 POLR2J3Q9H1A7 115 aaKnown RBP9.45□□□□□ -0.9
SDCBP-211ENST00000523441 FN3KQ9H479 309 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 RANBP3Q9H6Z4 567 aaPredicted RBP9.45□□□□□ -0.9
SDCBP-211ENST00000523441 RAB18Q9NP72 206 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 SERTAD4Q9NUC0 356 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 ATPIF1Q9UII2 106 aa9.45□□□□□ -0.9
SDCBP-211ENST00000523441 NOP16Q9Y3C1 178 aaKnown RBP9.45□□□□□ -0.9
SDCBP-211ENST00000523441 DYNC2H1Q8NCM8 4307 aaKnown RBP9.45□□□□□ -0.9
SDCBP-211ENST00000523441 M0R135 149 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 CCDC159P0C7I6 412 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 SLC2A1P11166 492 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 COX7A1P24310 79 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 MDH1P40925 334 aaKnown RBP9.44□□□□□ -0.9
SDCBP-211ENST00000523441 RPS27P42677 84 aaKnown RBP9.44□□□□□ -0.9
SDCBP-211ENST00000523441 CDKN2AP42771 156 aaKnown RBP9.44□□□□□ -0.9
SDCBP-211ENST00000523441 MRPL19P49406 292 aaKnown RBP9.44□□□□□ -0.9
SDCBP-211ENST00000523441 GSK3BP49841 420 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 TPTEP56180 551 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 BLMHQ13867 455 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 TRAM2Q15035 370 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 KHDC1LQ5JSQ8 128 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 TEX36Q5VZQ5 186 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 NCR3LG1Q68D85 454 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 COLCA1Q6ZS62 124 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 RRM2BQ7LG56 351 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 FAM122BQ7Z309 247 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
SDCBP-211ENST00000523441 ZNF799Q96GE5 643 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 DDOQ99489 341 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
SDCBP-211ENST00000523441 NDEL1Q9GZM8 345 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms