RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CCL1P22362 96 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 FKBP2P26885 142 aaKnown RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 HRH1P35367 487 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CD96P40200 585 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 DSCR4P56555 118 aaPredicted RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ENDOGQ14249 297 aaKnown RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NHLRC3Q5JS37 347 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PEAR1Q5VY43 1037 aaPredicted RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RPS19BP1Q86WX3 136 aaKnown RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM156Q8N614 296 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ANGPTL6Q8NI99 470 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NTNG2Q96CW9 530 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LIN37Q96GY3 246 aaPredicted RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LYZL4Q96KX0 146 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ARL6Q9H0F7 186 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 DKKL1Q9UK85 242 aa9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TRAV14DV4A0A0A6YYC5 116 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NSG1A0A0A6YYJ2 146 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 A0A0G2JMM0 328 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 A0A1W2PPB8 328 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 A0A1W2PRS3 328 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 KIR3DP1A8MWS1 328 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 DISC1C4P0D8 188 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SOCS1O15524 211 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LAMTOR5O43504 91 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ERCC1P07992 297 aaPredicted RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 HCKP08631 526 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C4BPBP20851 252 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RPS18P62269 152 aaKnown RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TRA2AQ13595 282 aaKnown RBP eCLIP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MEF2DQ14814 521 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PLAC9Q5JTB6 97 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LRRC18Q8N456 261 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR14K1Q8NGZ2 314 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SLC39A7Q92504 469 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NABP1Q96AH0 204 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF775Q96BV0 537 aaPredicted RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SPOCK3Q9BQ16 436 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MYOZ1Q9NP98 299 aaPredicted RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 HPF1Q9NWY4 346 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SLC2A8Q9NY64 477 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 FBLN5Q9UBX5 448 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 KCNN3Q9UGI6 736 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MYO7BQ6PIF6 2116 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 A0A0J9YW62 118 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CCSO14618 274 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TNFSF11O14788 317 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF250P15622 560 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MSR1P21757 451 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CASRP41180 1078 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 MLF1P58340 268 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RAB14P61106 215 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 GRB2P62993 217 aaKnown RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 DOK3Q7L591 496 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CCDC28AQ8IWP9 274 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM123Q8N131 208 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR9K2Q8NGE7 335 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM54Q969K7 222 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZNF837Q96EG3 531 aaPredicted RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SRXN1Q9BYN0 137 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CST11Q9H112 138 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 IFT46Q9NQC8 304 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SLC39A1Q9NY26 324 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR2AT4A6NND4 320 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NPIPA2E9PIF3 369 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 F5H5K5 113 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NPIPA3F8WFD2 350 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 I3L521 148 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CDC14BO60729 498 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 HLA-AP01891 365 aaKnown RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RSPO1Q2MKA7 263 aaPredicted RBP9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 C10orf128Q5T292 105 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LIN54Q6MZP7 749 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CRIP3Q6Q6R5 217 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ALKAL2Q6UX46 152 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PGAP1Q75T13 922 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 ZIC4Q8N9L1 334 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NPRL2Q8WTW4 380 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PGAM5Q96HS1 289 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PRRT1Q99946 306 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 NELFAQ9H3P2 528 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 FN3KRPQ9HA64 309 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 KIAA1549Q9HCM3 1950 aa9.47□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RAD51DO75771 328 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CER1O95813 267 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PMP2P02689 132 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 RRASP10301 218 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CD34P28906 385 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 FOLR3P41439 243 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 DUSP3P51452 185 aaPredicted RBP9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM50BP56557 158 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LSM6P62312 80 aaKnown RBP9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 PPP1R1AQ13522 171 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 LPAL2Q16609 132 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 AANATQ16613 207 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 CLPPQ16740 277 aaPredicted RBP9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 OR5D18Q8NGL1 313 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 SSC4DQ8WTU2 575 aa9.46□□□□□ -0.89
RAB11FIP1-204ENST00000522774 TMEM41AQ96HV5 264 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms