RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 C8orf82Q6P1X6 216 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 DNM1P34Q6PK57 102 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 VMO1Q7Z5L0 202 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 CYP4Z1Q86W10 505 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 FAM86B1Q8N7N1 296 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 SCCPDHQ8NBX0 429 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 OR52J3Q8NH60 311 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 C7orf34Q96L11 122 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 C16orf95Q9H693 158 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 FGFR1OP2Q9NVK5 253 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 RPUSD1Q9UJJ7 312 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 CAPN7Q9Y6W3 813 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 RYR3Q15413 4870 aa12.57□□□□□ -0.4
TRAPPC9-213ENST00000522504 TRAV38-1A0A0B4J264 116 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 M0R135 149 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 GMDSO60547 372 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 RFX4Q33E94 735 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 C11orf53Q8IXP5 236 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 PLPP7Q8NBV4 271 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 FANK1Q8TC84 345 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 ZNRF4Q8WWF5 429 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 ZNF799Q96GE5 643 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 DHRS1Q96LJ7 313 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 OR52D1Q9H346 318 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 CNTD2Q9H8S5 307 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 AURKCQ9UQB9 309 aa12.56□□□□□ -0.4
TRAPPC9-213ENST00000522504 ZNF816-ZNF321PA0A0X1KG74 233 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 G3V4G9 280 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 ARPC3O15145 178 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 NDUFA2O43678 99 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 RHCEP18577 417 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 TPTEP56180 551 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 CDONQ4KMG0 1287 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 TEX36Q5VZQ5 186 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 LYPD4Q6UWN0 246 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 GDPGP1Q6ZNW5 385 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 ARPINQ7Z6K5 226 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 WDR86Q86TI4 376 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 LY6G5BQ8NDX9 201 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 SDR9C7Q8NEX9 313 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 OR2AJ1Q8NGZ0 328 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 ST8SIA4Q92187 359 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 FAM162AQ96A26 154 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 CCL13Q99616 98 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 SLC22A4Q9H015 551 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 PPP1R3EQ9H7J1 279 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 MRGBPQ9NV56 204 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 MRPL15Q9P015 296 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 KAAG1Q9UBP8 84 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 DNAJB11Q9UBS4 358 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 AP3M1Q9Y2T2 418 aa12.55□□□□□ -0.4
TRAPPC9-213ENST00000522504 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 GGT3PA6NGU5 568 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 A6NLC8 198 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 TSPAN9O75954 239 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 RENP00797 406 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 HLA-DQA2P01906 255 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 PRB2P02812 416 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 TROVE2P10155 538 aaKnown RBP eCLIP12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 OTX1P32242 354 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 PYCR1P32322 319 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 EGR3Q06889 387 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 PCK2Q16822 640 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 SLC36A3Q495N2 470 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 DHRS7BQ6IAN0 325 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 LNX2Q8N448 690 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 PNKDQ8N490 385 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 Q8N7P7 452 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 OR56B2PQ8NGI1 322 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 IFT27Q9BW83 186 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 DPAGT1Q9H3H5 408 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 FAM53CQ9NYF3 392 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 ZNRD1Q9P1U0 126 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 ONECUT1Q9UBC0 465 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 VPREB3Q9UKI3 123 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 NOP16Q9Y3C1 178 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 FAM96BQ9Y3D0 163 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 FAM32AQ9Y421 112 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 KPTNQ9Y664 436 aa12.54□□□□□ -0.4
TRAPPC9-213ENST00000522504 hCG_1807616A0A1W2PRN6 198 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 TVP23AA6NH52 213 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 RNASEK-C17orf49H0YIS7 233 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 ECDO95905 644 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 SLC2A1P11166 492 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 COX4I1P13073 169 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 AMY2BP19961 511 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 SLC6A6P31641 620 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 KLRD1Q13241 179 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 C2orf68Q2NKX9 166 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 BEAN1Q3B7T3 259 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 FBLN7Q53RD9 439 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 WDR38Q5JTN6 314 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 SLC35F1Q5T1Q4 408 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 FAM216BQ8N7L0 139 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 RP9Q8TA86 221 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms