RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ICMTO60725 284 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 RGS9O75916 674 aaPredicted RBP11.52□□□□□ -0.56
CLK4-210ENST00000522136 ACHEP22303 614 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 TNK1Q13470 666 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 YIF1BQ5BJH7 314 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 NCMAPQ5T1S8 102 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 FOXB2Q5VYV0 432 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 C22orf42Q6IC83 251 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 CD200R1LQ6Q8B3 271 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 CEACAM19Q7Z692 300 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 SLC25A40Q8TBP6 338 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 TSEN15Q8WW01 171 aaKnown RBP11.52□□□□□ -0.56
CLK4-210ENST00000522136 RBM38Q9H0Z9 239 aaKnown RBP11.52□□□□□ -0.56
CLK4-210ENST00000522136 ENPP5Q9UJA9 477 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 FZR1Q9UM11 496 aa11.52□□□□□ -0.56
CLK4-210ENST00000522136 PLCE1Q9P212 2302 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 TRDV1A0A1B0GX56 115 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 CCDC160A6NGH7 325 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 XRCC2O43543 280 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 SC5DO75845 299 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 HLA-DPB1P04440 258 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 OCM2P0CE71 109 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 IGFBP2P18065 325 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 CCL1P22362 96 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 RAD52P43351 418 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 FAM3AP98173 230 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 MALLQ13021 153 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 SNTB2Q13425 540 aaKnown RBP11.52□□□□□ -0.57
CLK4-210ENST00000522136 MSMPQ1L6U9 139 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 ADAM5Q6NVV9 412 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 VHLLQ6RSH7 139 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 SLC22A25Q6T423 547 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 UNQ9370/PRO34162Q6UXP9 181 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 OR13C3Q8NGS6 347 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 OR14K1Q8NGZ2 314 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 SPSB4Q96A44 273 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 ESRP2Q9H6T0 727 aaKnown RBP11.52□□□□□ -0.57
CLK4-210ENST00000522136 TXNL4BQ9NX01 149 aaKnown RBP11.52□□□□□ -0.57
CLK4-210ENST00000522136 SSR3Q9UNL2 185 aa11.52□□□□□ -0.57
CLK4-210ENST00000522136 hCG_38984A0A1B0GV85 526 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 ZNF879B4DU55 563 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 PIN1P1O15428 100 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 ACKR3P25106 362 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 MPV17P39210 176 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 VBP1P61758 197 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 TRAM1Q15629 374 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 CTF1Q16619 201 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 Q499Y3 187 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 ZMAT1Q5H9K5 638 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 DOK3Q7L591 496 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 MRPL21Q7Z2W9 205 aaKnown RBP11.51□□□□□ -0.57
CLK4-210ENST00000522136 DMRTC2Q8IXT2 367 aaPredicted RBP11.51□□□□□ -0.57
CLK4-210ENST00000522136 PLPP7Q8NBV4 271 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 OR5L1Q8NGL2 311 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 AKAP1Q92667 903 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLK4-210ENST00000522136 FGGYQ96C11 551 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 ADAT3Q96EY9 351 aaPredicted RBP11.51□□□□□ -0.57
CLK4-210ENST00000522136 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
CLK4-210ENST00000522136 NOX4Q9NPH5 578 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 DHDHQ9UQ10 334 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 ABCA4P78363 2273 aa11.51□□□□□ -0.57
CLK4-210ENST00000522136 A1L4Q6 167 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 CLEC18AA5D8T8 446 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 DEFB108AA8MXU0 73 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 PRSS44E7EML9 344 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 GABARAPO95166 117 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 PLAUP00749 431 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 GSK3AP49840 483 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 FABP6P51161 128 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 NCS1P62166 190 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 NKX6-1P78426 367 aaPredicted RBP11.5□□□□□ -0.57
CLK4-210ENST00000522136 DMRTC1Q5HYR2 192 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 TMEM255AQ5JRV8 349 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 CLEC18BQ6UXF7 455 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 PGAP1Q75T13 922 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 CLEC18CQ8NCF0 446 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 NEUROG1Q92886 237 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 TMEM106AQ96A25 262 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 ISOC1Q96CN7 298 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 CMBLQ96DG6 245 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 PIK3IP1Q96FE7 263 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 MARS2Q96GW9 593 aaKnown RBP11.5□□□□□ -0.57
CLK4-210ENST00000522136 DERL3Q96Q80 235 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 RGCCQ9H4X1 137 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 ZNF275Q9NSD4 429 aaPredicted RBP11.5□□□□□ -0.57
CLK4-210ENST00000522136 ATP23Q9Y6H3 246 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 V9GYS6 101 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 SHISA9B4DS77 424 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 DHRS3O75911 302 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 SERPINA3P01011 423 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 FAHP16930 419 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 LOXP28300 417 aaPredicted RBP11.5□□□□□ -0.57
CLK4-210ENST00000522136 ALKBH6Q3KRA9 238 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 BEX5Q5H9J7 111 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 OR2T2Q6IF00 324 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 MEX3BQ6ZN04 569 aaKnown RBP11.5□□□□□ -0.57
CLK4-210ENST00000522136 KBTBD8Q8NFY9 601 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 KLF14Q8TD94 323 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms