RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 EXOSC8Q96B26 276 aaKnown RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 OTUB1Q96FW1 271 aaPredicted RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 SLC41A3Q96GZ6 507 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 FAM71F1Q96KD3 344 aaPredicted RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 PGLYRP3Q96LB9 341 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 ZNF681Q96N22 645 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 MS4A4EQ96PG1 132 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 UTP23Q9BRU9 249 aaKnown RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 DPH7Q9BTV6 452 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 TMED9Q9BVK6 235 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 MED28Q9H204 178 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 OR2AG1Q9H205 316 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 ABCG5Q9H222 651 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 OR51J1Q9H342 316 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 CMC2Q9NRP2 79 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 IMP3Q9NV31 184 aaKnown RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 MED9Q9NWA0 146 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 LYARQ9NX58 379 aaKnown RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 BABAM2Q9NXR7 383 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 KLHL28Q9NXS3 571 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 HAO2Q9NYQ3 351 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 GLTPQ9NZD2 209 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 CNIH4Q9P003 139 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 ZNF581Q9P0T4 197 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 ABRACLQ9P1F3 81 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 C5AR2Q9P296 337 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 TAC3Q9UHF0 121 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 SCP2D1Q9UJQ7 156 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 ZNF223Q9UK11 482 aaPredicted RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 ING4Q9UNL4 249 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 PLCL2Q9UPR0 1127 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 CCL26Q9Y258 94 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 WDR83OSQ9Y284 106 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 ASF1AQ9Y294 204 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 ZNF443Q9Y2A4 671 aaPredicted RBP3.53□□□□□ -1.84
SGCE-211ENST00000522045 TMEM5Q9Y2B1 443 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 FKBP7Q9Y680 259 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 U3KQ87 197 aa3.53□□□□□ -1.84
SGCE-211ENST00000522045 IGKV1-8A0A0C4DH67 115 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 EDDM13A0A1B0GTR0 161 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 A0A1B0GUH1 482 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 C2orf92A0A1B0GVN3 265 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 TRAPPC13A5PLN9 417 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 LRIT2A6NDA9 550 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 NAP1L6A6NFF2 107 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 ZSCAN5BA6NJL1 495 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SLC9B1P1A6NJY1 282 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 OR6C65A6NJZ3 312 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 CPSF4LA6NMK7 179 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 LRRN3E7EW58 273 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SMLR1H3BR10 107 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 CDC42EP2O14613 210 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SLC9A3R1O14745 358 aaPredicted RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 BET1O15155 118 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 FABP7O15540 132 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 TPD52L2O43399 206 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 SNAPC5O75971 98 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 TGM6O95932 706 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 TCRBP04435 133 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 HMGN2P05204 90 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 GUSBP08236 651 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 UCHL1P09936 223 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 RRASP10301 218 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SAGP10523 405 aaPredicted RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 ADRB3P13945 408 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 CSNK2A2P19784 350 aaPredicted RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 TBXA2RP21731 343 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 ZP3P21754 424 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 HIST1H1TP22492 207 aaPredicted RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 AADACP22760 399 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 PSMB5P28074 263 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 GPR4P46093 362 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 PITPNBP48739 271 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 RAB28P51157 221 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SRP54P61011 504 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 SNRPD2P62316 118 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 MRPS10P82664 201 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 TSTA3Q13630 321 aaPredicted RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 GGTLC2Q14390 218 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 ELAVL3Q14576 367 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 MAPK14Q16539 360 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 GSG1Q2KHT4 349 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 HNRNPA1L2Q32P51 320 aaKnown RBP3.52□□□□□ -1.85
SGCE-211ENST00000522045 KLHL12Q53G59 568 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SMUG1Q53HV7 270 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 FAM205BPQ63HN1 556 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SLC22A10Q63ZE4 541 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 SLC30A6Q6NXT4 461 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 ZNF836Q6ZNA1 936 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 UTS2BQ765I0 119 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 OLIG3Q7RTU3 272 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 ANKRD33Q7Z3H0 272 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 ADGRD2Q7Z7M1 963 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 LUZP2Q86TE4 346 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 LHFPL3Q86UP9 236 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 AMZ2Q86W34 360 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 AMIGO1Q86WK6 493 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 VRK2Q86Y07 508 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 NKAIN4Q8IVV8 208 aa3.52□□□□□ -1.85
SGCE-211ENST00000522045 NRMQ8IXM6 262 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms